Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00045 ATGTCTCGCACGGGCACTGCCACCGATTCCACCATAAGCGTCGATGGTGATGGTTCCGCCGGAGAGATCATGCTGTTTGGGGTTAGAGTTGTGGTTGATTCCATGAGGAAGAGCGTGAGTATGAATAATCTGTCTCAGTACGAGCATCCTCAGGACGCCGCAAACAATAATAACGGCAACAAGGAAGATACTCTGGCTGCCGGCTATGCTTCCGCGGATGAAGCTGCTGCTCATAATTCCGGCAGGCATCGCGAGCGTGAGCGTAAGCGAGGAGTTCCGTGGACAGAGGAAGAGCACAAGCTGTTCTTGCTGGGATTGCAGAAAGTTGGGAAAGGTGATTGGAGAGGGATCTCAAGGAACTACGTGAAAACTCGGACGCCTACACAGGTTGCGAGTCATGCTCAGAAGTACTTTCTCCGGCGAAGTAACCTCAATCGCCGACGCCGTAGATCCAGCCTTTTCGATATAACGACCGACACGGTCTCTGCAATCCCAATGGAAGATGAACAGATCCAGCATCAAGATTACGCGTCTCATTCAAATCCTATGTGCTCTGCAACCCCTGAAACCACCAACATGAATGGATTTCCAATGATGCCAGTATATCCGATGGGTGTTGGTTCTGGGATGATTTCAGTCCCAGTTTCAAATCCAATAGAAAAACTTACTCTTCGACAAGGAACGATGGACTGTAACGGGCAACCCCAGCTGGTCCGATCAATTGCAGTTCTTTCACATCCTCAAGCTTCTGAAGCATCTAATATCACATCAAGTTCAAGTTCAGATGTTGATCCACCTACGTTGTCTCTTGGGCTATCCTTATCTTCTGATCAAAGACAAACTTCAACAAGCCATCCTTCTATGCTTCCCATGCCACGTTTCAACAATGGAGATAACATCATAAGTGTTGCTTGA 915 0.482 MSRTGTATDSTISVDGDGSAGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDAANNNNGNKEDTLAAGYASADEAAAHNSGRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEDEQIQHQDYASHSNPMCSATPETTNMNGFPMMPVYPMGVGSGMISVPVSNPIEKLTLRQGTMDCNGQPQLVRSIAVLSHPQASEASNITSSSSSDVDPPTLSLGLSLSSDQRQTSTSHPSMLPMPRFNNGDNIISVA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00045 304 FunFam transcription factor MYB1R1 92 143 - -
Pral1231g00045 304 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Pral1231g00045 304 CDD SANT 93 138 IPR001005 -
Pral1231g00045 304 SMART sant 90 140 IPR001005 -
Pral1231g00045 304 PANTHER TRANSCRIPTION FACTOR KUA1 22 258 - -
Pral1231g00045 304 MobiDBLite consensus disorder prediction 252 304 - -
Pral1231g00045 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Pral1231g00045 304 MobiDBLite consensus disorder prediction 73 92 - -
Pral1231g00045 304 Gene3D - 92 144 - -
Pral1231g00045 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Pral1231g00045 304 MobiDBLite consensus disorder prediction 252 290 - -
Pral1231g00045 304 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Pral1231g00045 304 MobiDBLite consensus disorder prediction 77 92 - -
Pral1231g00045 304 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Pral1231g00045 304 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00045 Pral-Chr1231 222569 224754 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral1231g00045 Myb_DNA-binding 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00045 - - aip:107632799 367.466