Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00032 ATGTGCAGTGTTCCTGTAGTGTTACTGCAGGAAGTTTTGCCATGGATGGTATCATTCCTTTCTGCAGACAAACAAGCAGAAGTTCGGAAGTTTTTAAATGAAATTACGCCAATGGAGAAAGAACTGCAAGAGGTTTTCATTGCTTGGCTTGGTAGCAACACCCAAATCTTCACCGAGGACTGTTATCTGAATGGAGTTATTCAATGTGCTGATGGATTCCTGGATATGAAAAGACCACGCGGGTTGAGTTATTGCAATACGAATTTTAAAGCCATTTCAAATCAGATGAAAGCAAATTGCTCAGACGTAGAAGATAGGGCCAATCAAGTTAATGTTCTTCATATTTGGCATAATGCCATCAAGAAAGATATGAAAGACATGTTAGAAGAACTTCATCAAATCAGAAACAACGCTTATCTTCATAATTTGGATTCGTTACTCATCCAATTAAAATTCTTCGCCGACGTTCTCACCTTCTACAGCAATGCTCAGAAGAAATTCTTTTACTCAGTTTTGAGTGAACTTGCTTATGGTTGGTTGACCAAGTCTAGCGAACAATTTCTTGGTGAAAGTCATATTGAAGATTTACAGCAGTTGTTATTGTATAATGCTGAAAGCGGCATGCCTTTGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGAACTATTTATGACACGAGTCAGCAAACAATTTGCTTTTCAAGAAACTCAGGTCTTTCCTATCATTCGCTTGAATCTCAACAACGAAATGCTAGAGGAACTCATTAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGTGATAACTTGGTTCTCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAGTGCCATAAAACAAGGAAATCCTTTTGTCCATGAAGCTTTTGCATCACTGGTACATGAGTGGTTCCGTGTTGGTAATTCAGGTAAAACTTCTATTGAAAAATTCCGACAAGACTTGCGACATATTTTCAAAAGCAAAAACTCTCTGTTAACTGAGCAAGTTAAGGAAGCTGCCGGGTTTTCGTTCTTAAATTATGACAAGCCTCGTAAAGGATCTATTGGTAAAAATGGTTTGTCTAGTTCATCATCTTCTGGATTCAACAATGGGACTAGATATGAGACACCATACTCTATGGGACTTAATACGCATATATTATTCCCTGCCACAGCTATGAAGTTAAATCACCGTCCTAGATTTCAGGCAGCTGATAGTCCTTCTGTTCCCTTTCTTGATGATACAAAACCCATTGACCTTATATTTTTCTTTCACAAGGCTATCAAGAATGATTTGGATTACCTTGTTCGTGGATCAGCTCAGATAGAAAACAATGTTGAAATGCTTGTGAATTTCAGCAAAAGATTCCATCTAATATGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCCTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTCTCTTACACGATTGATCACAAATTTGAAGTCGAACACTTCGACAAAATATCCTGTATCCTTGATAAGATGTTCGATCTACATTTTTCCGTTTCTAGTTCTGAAACAAATACATGGGAGCAAAGAATGCTAACGCATCATCAACAGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAATCGTGAAGAAATTGAAATTTGGCATTTAATTAGAGAATTCTTCTCCAATAAGGGGCAAATAAAAATCATAGGGTGCATTCTTGGAAGAATTAGAGCAGAAATATTACAAGATATGATACCCTGGTTAATGGCATCTTTAACACCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCACGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAGTGGTGGGATGGGTACAGGATAGCAAAGGAGGTACAGAGATCAAATGATCCTCCTCTGCGGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCAATGAGCTCCAAGGAGAATCCGCTTCCAACAAAAGCAAATTTTCCTCACAGACGGATCATATTGGTGATAATAATGAGCAGTCTCACTATTGCAATCGTCATGGCAAATCCCAGGTTCGTAAAGCTAAGAAGATTAGTAGTGAATGTTCAGAATGCAGAAATCAATTGAGTGATAACAACAAACAAACATGCACTCAAGTAACAGATATCACAAGTTGGATGGATGATAAAGGTCAGTCTTTTCAATTCTGTGAAAACTCTGGGGACTATGACCATCTTATGAAAATAAGTCCAGATGATCTGGAGAGGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAAAAGAAGTCATATATAATCCAGAATCTGCTGCTGAGCCGTTGGATTGTTAGACAGCATATCTCTTGTTCAGAAGGCACTGTCACAAACAATGGGCAGGAGGTTCCTGGGCAGAATCCGTCTTATAGGGACCCACTAAAATTGGTCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTACCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATGATGCATCAGATCATTTAACCGATAGGAAATCCATTACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAACCAATCGGTGCCGCTTGTTCAACTGTATCTTGCGGTAACTTACCCATGGCAAAGTACTACTGCAAGATCTGTAGATTGTTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGGAAGGGCTTGGGCTTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGTCTCGCTCCCTTACAGTACATATATGCAGAGAGAAATCTTTAGAGGACAACTGCCCAATTTGTCATGAATACATTTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCCATGTGGTCATGTCATGCACTCAACATGTTTTCAGGAGTATACCTACTTCAATTATACCTGCCCAATATGTTGCAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGATGCGTTATTGGCTGAAGAGAAAGTCCCCGACGAGCATCTGGGTCAAACTCAGATGATACTATGCAATGACTGTGAAAAGAAAGGAACCGCTCCCTTCCACTGGCTTTACCACAAATGTTCTTCTTGTGGGTCCTACAACACCAGAGTCATATGA 3231 0.3959 MCSVPVVLLQEVLPWMVSFLSADKQAEVRKFLNEITPMEKELQEVFIAWLGSNTQIFTEDCYLNGVIQCADGFLDMKRPRGLSYCNTNFKAISNQMKANCSDVEDRANQVNVLHIWHNAIKKDMKDMLEELHQIRNNAYLHNLDSLLIQLKFFADVLTFYSNAQKKFFYSVLSELAYGWLTKSSEQFLGESHIEDLQQLLLYNAESGMPLSEFVEKLCRELELFMTRVSKQFAFQETQVFPIIRLNLNNEMLEELISLSLHMMPLGLLKCVITWFSGHLSENESRSILSAIKQGNPFVHEAFASLVHEWFRVGNSGKTSIEKFRQDLRHIFKSKNSLLTEQVKEAAGFSFLNYDKPRKGSIGKNGLSSSSSSGFNNGTRYETPYSMGLNTHILFPATAMKLNHRPRFQAADSPSVPFLDDTKPIDLIFFFHKAIKNDLDYLVRGSAQIENNVEMLVNFSKRFHLICFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVEHFDKISCILDKMFDLHFSVSSSETNTWEQRMLTHHQQCRKLQEMCKSMHKLLSDHMNREEIEIWHLIREFFSNKGQIKIIGCILGRIRAEILQDMIPWLMASLTPEEQHVLMFLWSTIAKNTMFDEWLAEWWDGYRIAKEVQRSNDPPLRTVEPLEIISKYLSKEVLNELQGESASNKSKFSSQTDHIGDNNEQSHYCNRHGKSQVRKAKKISSECSECRNQLSDNNKQTCTQVTDITSWMDDKGQSFQFCENSGDYDHLMKISPDDLERAIRRVSRDSSLDLQKKSYIIQNLLLSRWIVRQHISCSEGTVTNNGQEVPGQNPSYRDPLKLVYGCKHYKRSCKLLPSCCNQLYTCIHCHNDASDHLTDRKSITKMMCMKCLKIQPIGAACSTVSCGNLPMAKYYCKICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMSRSLTVHICREKSLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFQEYTYFNYTCPICCKSLGDMQVYFRMLDALLAEEKVPDEHLGQTQMILCNDCEKKGTAPFHWLYHKCSSCGSYNTRVI 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00032 1076 Coils Coil 117 137 - -
Pral1231g00032 1076 ProSiteProfiles Zinc finger CHY-type profile. 834 903 IPR008913 GO:0008270
Pral1231g00032 1076 FunFam Zinc finger protein-related isoform 1 965 1014 - -
Pral1231g00032 1076 Pfam Zinc-ribbon 1017 1074 IPR039512 -
Pral1231g00032 1076 CDD RING-H2_Pirh2-like 969 1011 - -
Pral1231g00032 1076 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 963 1013 IPR013083 -
Pral1231g00032 1076 Gene3D - 1041 1076 - -
Pral1231g00032 1076 ProSiteProfiles Zinc finger RING-type profile. 970 1011 IPR001841 -
Pral1231g00032 1076 Gene3D nmb1532 protein domain like 105 259 - -
Pral1231g00032 1076 Gene3D nmb1532 protein domain like 421 591 - -
Pral1231g00032 1076 MobiDBLite consensus disorder prediction 679 698 - -
Pral1231g00032 1076 SMART ring_2 970 1011 IPR001841 -
Pral1231g00032 1076 Pfam Ring finger domain 968 1011 IPR001841 -
Pral1231g00032 1076 SUPERFAMILY CHY zinc finger-like 832 897 IPR037274 GO:0008270
Pral1231g00032 1076 Pfam CHY zinc finger 841 916 IPR008913 GO:0008270
Pral1231g00032 1076 ProSiteProfiles Zinc finger CTCHY-type profile. 906 969 IPR017921 -
Pral1231g00032 1076 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 468 1076 - -
Pral1231g00032 1076 MobiDBLite consensus disorder prediction 679 707 - -
Pral1231g00032 1076 SUPERFAMILY Zinc hairpin stack 907 961 IPR037275 -
Pral1231g00032 1076 SUPERFAMILY RING/U-box 957 1016 - -
Pral1231g00032 1076 CDD Hr-like 425 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00032 Pral-Chr1231 139783 146916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00032 1 666 C2H2 Transcription Factor Family AT3G18290 28.258 4.17e-76 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00032 K16276 - gmx:100802706 1514.98