Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00031 ATGGACCTTCTTGCGCCGGATAAGGAGGAGAACATTGAACATGACTCGTCGGATTATTGCGTCTCCCGAGTTCGACTCGTCGATGCTCCTGTACTCTTATTTGTTTGCTTCCACAAAGCTCTTCGCGGAGAACTCAACGAGCTTCGGAGCTTGGCGGAAACGTCATCGCTGGAGAATGCATCACACAACCCGGAGCTTATTGTTAAACTTCAACGGAGATTCGAGTTTCTCAAACTAGTTCTTAAGTATCATTGCGTCGCGGAAGACGAGGTTATCTTCCCTGCATTGGATGTACATGTAAAAAATGTAGTAAGTACTTATTCCCTTGAACATAACAACATCGATGAAGCCTTCAACTCAATCTTTCACTATTTAGATGATTTGATGGATCCAAATGAGAATATTTCCAACCTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTCCAGCATATGCAGAAGGAAGAAGAGCAGGTTTTTCCTCTCTTGATACAGAAAGTTTCTATCGAGGAACAGGCTTTGCTGGTCTGGCAATTCATGTGCAGTGTTCCTGTAGTGTTACTGCAGGAAGTTTTGCCATGGATGGTATCATTCCTTTCTGCAGACAAACAAGCAGAAGTTCGGAAGTTTTTAAATGAAATTACGCCAATGGAGAAAGAACTGCAAGAGGTTTTCATTGCTTGGCTTGGTAGCAACACCCAAATCTTCACCGAGGACTGTTATCTGAATGGAGTTATTCAATGTGCTGATGGATTCCTGGATATGAAAAGACCACGCGGGTTGAGTTATTGCAATACGAATTTTAAAGCCATTTCAAATCAGATGAAAGCAAATTGCTCAGACGTAGAAGATAGGGCCAATCAAGTTAATGTTCTTCATATTTGGCATAATGCCATCAAGAAAGATATGAAAGACATGTTAGAAGAACTTCATCAAATCAGAAACAACGCTTATCTTCATAATTTGGATTCGTTACTCATCCAATTAAAATTCTTCGCCGACGTTCTCACCTTCTACAGCAATGCTCAGAAGAAATTCTTTTACTCAGTTTTGAGTGAACTTGCTTATGGTTGGTTGACCAAGTCTAGCGAACAATTTCTTGGTGAAAGTCATATTGAAGATTTACAGCAGTTGTTATTGTATAATGCTGAAAGCGGCATGCCTTTGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGAACTATTTATGACACGAGTCAGCAAACAATTTGCTTTTCAAGAAACTCAGGTCTTTCCTATCATTCGCTTGAATCTCAACAACGAAATGCTAGAGGAACTCATTAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGTGATAACTTGGTTCTCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAGTGCCATAAAACAAGGAAATCCTTTTGTCCATGAAGCTTTTGCATCACTGGTACATGAGTGGTTCCGTGTTGGTAATTCAGGTAAAACTTCTATTGAAAAATTCCGACAAGACTTGCGACATATTTTCAAAAGCAAAAACTCTCTGTTAACTGAGCAAGTTAAGGAAGCTGCCGGGTTTTCGTTCTTAAATTATGACAAGCCTCGTAAAGGATCTATTGGTAAAAATGGTTTGTCTAGTTCATCATCTTCTGGATTCAACAATGGGACTAGATATGAGACACCATACTCTATGGGACTTAATACGCATATATTATTCCCTGCCACAGCTATGAAGTTAAATCACCGTCCTAGATTTCAGGCAGCTGATAGTCCTTCTGTTCCCTTTCTTGATGATACAAAACCCATTGACCTTATATTTTTCTTTCACAAGGCTATCAAGAATGATTTGGATTACCTTGTTCGTGGATCAGCTCAGATAGAAAACAATGTTGAAATGCTTGTGAATTTCAGCAAAAGATTCCATCTAATATGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCCTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTCTCTTACACGATTGATCACAAATTTGAAGTCGAACACTTCGACAAAATATCCTGTATCCTTGATAAGATGTTCGATCTACATTTTTCCGTTTCTAGTTCTGAAACAAATACATGGGAGCAAAGAATGCTAACGCATCATCAACAGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAATCGTGAAGAAATTGAAATTTGGCATTTAATTAGAGAATTCTTCTCCAATAAGGGGCAAATAAAAATCATAGGGTGCATTCTTGGAAGAATTAGAGCAGAAATATTACAAGATATGATACCCTGGTTAATGGCATCTTTAACACCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCACGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAGTGGTGGGATGGGTACAGGATAGCAAAGGAGGTACAGAGATCAAATGATCCTCCTCTGCGGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCAATGAGCTCCAAGGAGAATCCGCTTCCAACAAAAGCAAATTTTCCTCACAGACGGATCATATTGGTGATAATAATGAGCAGTCTCACTATTGCAATCGTCATGGCAAATCCCAGGTTCGTAAAGCTAAGAAGATTAGTAGTGAATGTTCAGAATGCAGAAATCAATTGAGTGATAACAACAAACAAACATGCACTCAAGTAACAGATATCACAAGTTGGATGGATGATAAAGGTCAGTCTTTTCAATTCTGTGAAAACTCTGGGGACTATGACCATCTTATGAAAATAAGTCCAGATGATCTGGAGAGGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAAAAGAAGTCATATATAATCCAGAATCTGCTGCTGAGCCGTTGGATTGTTAGACAGCATATCTCTTGTTCAGAAGGCACTGTCACAAACAATGGGCAGGAGGTTCCTGGGCAGAATCCGTCTTATAGGGACCCACTAAAATTGGTCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTACCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATGATGCATCAGATCATTTAACCGATAGGAAATCCATTACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAACCAATCGGTGCCGCTTGTTCAACTGTATCTTGCGGTAACTTACCCATGGCAAAGTACTACTGCAAGATCTGTAGATTGTTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGGAAGGGCTTGGGCTTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGTCTCGCTCCCTTACAGTACATATATGCAGAGAGAAATCTTTAGAGGACAACTGCCCAATTTGTCATGAATACATTTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCCATGTGGTCATGTCATGCACTCAACATGTTTTCAGGAGTATACCTACTTCAATTATACCTGCCCAATATGTTGCAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGATGCGTTATTGGCTGAAGAGAAAGTCCCCGACGAGCATCTGGGTCAAACTCAGATGATACTATGCAATGACTGTGAAAAGAAAGGAACCGCTCCCTTCCACTGGCTTTACCACAAATGTTCTTCTTGTGGGTCCTACAACACCAGAGTCATATGA 3783 0.4013 MDLLAPDKEENIEHDSSDYCVSRVRLVDAPVLLFVCFHKALRGELNELRSLAETSSLENASHNPELIVKLQRRFEFLKLVLKYHCVAEDEVIFPALDVHVKNVVSTYSLEHNNIDEAFNSIFHYLDDLMDPNENISNLFQELICCIGILQATTFQHMQKEEEQVFPLLIQKVSIEEQALLVWQFMCSVPVVLLQEVLPWMVSFLSADKQAEVRKFLNEITPMEKELQEVFIAWLGSNTQIFTEDCYLNGVIQCADGFLDMKRPRGLSYCNTNFKAISNQMKANCSDVEDRANQVNVLHIWHNAIKKDMKDMLEELHQIRNNAYLHNLDSLLIQLKFFADVLTFYSNAQKKFFYSVLSELAYGWLTKSSEQFLGESHIEDLQQLLLYNAESGMPLSEFVEKLCRELELFMTRVSKQFAFQETQVFPIIRLNLNNEMLEELISLSLHMMPLGLLKCVITWFSGHLSENESRSILSAIKQGNPFVHEAFASLVHEWFRVGNSGKTSIEKFRQDLRHIFKSKNSLLTEQVKEAAGFSFLNYDKPRKGSIGKNGLSSSSSSGFNNGTRYETPYSMGLNTHILFPATAMKLNHRPRFQAADSPSVPFLDDTKPIDLIFFFHKAIKNDLDYLVRGSAQIENNVEMLVNFSKRFHLICFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVEHFDKISCILDKMFDLHFSVSSSETNTWEQRMLTHHQQCRKLQEMCKSMHKLLSDHMNREEIEIWHLIREFFSNKGQIKIIGCILGRIRAEILQDMIPWLMASLTPEEQHVLMFLWSTIAKNTMFDEWLAEWWDGYRIAKEVQRSNDPPLRTVEPLEIISKYLSKEVLNELQGESASNKSKFSSQTDHIGDNNEQSHYCNRHGKSQVRKAKKISSECSECRNQLSDNNKQTCTQVTDITSWMDDKGQSFQFCENSGDYDHLMKISPDDLERAIRRVSRDSSLDLQKKSYIIQNLLLSRWIVRQHISCSEGTVTNNGQEVPGQNPSYRDPLKLVYGCKHYKRSCKLLPSCCNQLYTCIHCHNDASDHLTDRKSITKMMCMKCLKIQPIGAACSTVSCGNLPMAKYYCKICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMSRSLTVHICREKSLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFQEYTYFNYTCPICCKSLGDMQVYFRMLDALLAEEKVPDEHLGQTQMILCNDCEKKGTAPFHWLYHKCSSCGSYNTRVI 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00031 1260 SUPERFAMILY RING/U-box 1141 1200 - -
Pral1231g00031 1260 ProSiteProfiles Zinc finger CHY-type profile. 1018 1087 IPR008913 GO:0008270
Pral1231g00031 1260 CDD Hr-like 609 754 - -
Pral1231g00031 1260 Pfam CHY zinc finger 1025 1100 IPR008913 GO:0008270
Pral1231g00031 1260 Pfam Zinc-ribbon 1201 1258 IPR039512 -
Pral1231g00031 1260 SUPERFAMILY CHY zinc finger-like 1016 1081 IPR037274 GO:0008270
Pral1231g00031 1260 Gene3D - 1225 1260 - -
Pral1231g00031 1260 ProSiteProfiles Zinc finger RING-type profile. 1154 1195 IPR001841 -
Pral1231g00031 1260 CDD RING-H2_Pirh2-like 1153 1195 - -
Pral1231g00031 1260 SMART ring_2 1154 1195 IPR001841 -
Pral1231g00031 1260 FunFam Zinc finger protein-related isoform 1 1149 1198 - -
Pral1231g00031 1260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1147 1197 IPR013083 -
Pral1231g00031 1260 MobiDBLite consensus disorder prediction 863 891 - -
Pral1231g00031 1260 Gene3D nmb1532 protein domain like 289 442 - -
Pral1231g00031 1260 Gene3D nmb1532 protein domain like 605 775 - -
Pral1231g00031 1260 Gene3D nmb1532 protein domain like 29 186 - -
Pral1231g00031 1260 SUPERFAMILY Zinc hairpin stack 1091 1145 IPR037275 -
Pral1231g00031 1260 CDD Hr-like 37 166 - -
Pral1231g00031 1260 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 652 1260 - -
Pral1231g00031 1260 MobiDBLite consensus disorder prediction 863 882 - -
Pral1231g00031 1260 Coils Coil 301 321 - -
Pral1231g00031 1260 ProSiteProfiles Zinc finger CTCHY-type profile. 1090 1153 IPR017921 -
Pral1231g00031 1260 Pfam Hemerythrin HHE cation binding domain 38 168 IPR012312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00031 Pral-Chr1231 139783 151401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00031 29 850 C2H2 Transcription Factor Family AT3G18290 31.186 9.15e-118 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00031 K16276 - gmx:100802706 1739.16