Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00029 ATGGGGCATAAAAAGCGAAACCCTGCCCCACGTTCCAAACAATCTGTGGCGGCTTCTCCGGTGACACAATCTGCCATCGGCGGAGCCGCCAATGGCCCTACTTCAGCCGAGTCAGAGCTGTGCATGAGTTCTAATGACACTATTCAAAGCGCGACCAAGATCGAGCTGTCTCCTCAACCCGAGCCTTCGGTTTACTCCACAATCAAGCTTGAATGTGAACGGGCCCTCAATGCGCTCAGACGTGGTAATCACACTAAGGCACTGAGGCTTATGAAGGAGTCATGCTCCAGACATGACGGCTCCGCTTACTCTGCCTTGATTCATCGAGTTCAGGGTACCGTATGTGTCAAAGTGGCCTCAATTATTGATGACCCAAGTGCGAAGCAAAGACATTTGAAGAATGCAATTGAGTCTGCGCGAAGAGCCGTTGAGCTATCGCCCAGTTCTGTTGAGTTTGCCCATTTTTATGCAAATTTGTTATACGAGGCAGCAAATGATTCGACCGAATACGAGCAGGTGGTGAAGGAGTGTGAAAGGGCACTCGGGATTCCAAATCCAATTGATCCTGCAAAGGAGAGCTTGCAGGATGAGAGCCAGCAGAAAATATCAACCCCTGACGCCCGTATAGCTCATGTCCAGAATGAGTTGCGGCAGCTAATTCAGAAGTCAAACATAGCTTCCTTATCAACGTGGATGAAAAATCTGGGTAATGGGGAGGAGAAATTCCGTTTGATTCCAATACGGAGGGCAACAGAGGACCCAATGGAGGCGAGGTTGGTTCAAACTAGAAGGCCAAATGAGATAAAAAAGGTGACCAAGACTCCCGATGAGAGAAGAAAAGAAATTGAAGTTCGAGTTGCTGCTGCAAGGCTATTGCAGCAAAAGTCAGAGTCACCCCAATCCCAGAACCAAGGGGAGAGGGATGGCAGGACAGTGGATTCATCTTCAGGATCTGGGCAGAGGATCAGTGAGAGGCGGAAGCATGGTCATGTCCGAAAAGCTGGCTCTACATCTGAAAGGAGAGATTGGGTTCGTTTATATTGGAATTTGATGAGTATTGATTTGAAGAGGGAGTTCCTTAGGATTAGGGTATGTGATCTCAAATCTCACTTTGGGTCTTCAAAGGATGCTTTGCTGAATGACATTGTAGCAGAAGCTTTGTCGTATGCTGAGGCCAACAAAACATGGAGATTTTGGCTTTGCTGCCGCTGTGGTGAGAAGTTTTCAGATTCGGAGTCTCACATGCAGCATGTTGTGCAGGAACACATGGGGAATCTTTTACCTAAAATGCAAAGACTTTTGCCTCAAAATGTTGACAACGAATGGATTGAGTTGATATCTAAGTGTTCTTGGAAACCTCTAGATGCATGTGCTGCTGTGAAAATGCTTGAAAGTCAAGCAAAATGTGATGATTTTTCATTTCCTGAGGATTCCTATGTGGATCATATCGAGGAGCACCATGATTGCTTTAAAGACTCTAATTATTTTTTGCCTAAAAGGGGACATGACCTTGGTAGCTGTACACCAGATAGAAGTAACTGTTATAAATCTGAGGAAACTGGTATTGCAGATGGTGTTGAAGTTGAACGGTCTGTAGCATATTCCCATTCTGATGGTTGGCCATTGTCAGATGACTCTGAGCGTGCAAAGCTTCTTGAGAAAATTCATGCAGTACTTGATATGCTTATTAGACACAAATATCTTGCTGCTAGTCATCTTGGCAAGGTCATACAGTTTACCATGGATGAGATACAGGGACTTGCTGCTGGATCTCAGCTTTTGAACCATGGTTTAGACCAATCACCAACGTGCATATGCTTTTTGGGAGCCCCACAACTCAAGAAAATTCTCAAATTTTTGCAGGAGCTGTCTCATGCTTGTGGTTTGGGCAGATATGTTGATAAAAGTATTAGTCCCATGGATGATTTACACAATTCAAATCAAATTCCCGAGATTAAAGAGAAGATTGTTCTCAATGGAGATGCATCATGCCTTCTTCTAGATGAATGTTTAGTGCCTGCAGAAATCACTCCTAGTGCTACTAAGAGTGCTGCATTGGATGATGTGACTACCCCGACCTCTAATGATGTTGCTTCACACACCGATCCTTTCCTATCTTGGATATTTTCAGGTTCATCTTGTGGGGATCAATTGACTTTGTGGATGAGAACAAAAGAAGATAAAAGATGTCAAGGAATGGAACTTGTCCAGACTCTTGAGAAGGAGTTTTATCACCTACAGAGCCTTTCTGAGAAGAAATGTGAGCGAATGAATTATGAGGAAGCACTGCAGGTTGTAGAGGACCTTTGCCTAGAAGAAGGTAAGAAGAGGGAAAATTTCACCAAATTTGTTCAGCAAAGCTATGGATCTGTTTTGAGAAAGCGGAGAGAAGAGCTCATTGAGAGTGAAAATGATGTCATGTATGTTGGCAATAGATTTGAGTTGGATGCCATAACAAATGTTCTGCAAGAAGCAGAGGCAATGAATGTTAATCAATTTGGTTATGAGGAAAACTATACTGGTGTATGTGACGTGGAATCTGGTGAAGATGATGAATGGAGAATGAAAGACTATTTGCATCAAATGGATAGCTACATAGAAATAGCCATTCAGAAACTGAAGGAAAACCTATCTGTGGAGCTTAGCAAAATTGATGCACGGATCATGAGAAATGTTACAGAGATGCAGCAGTTGGAACTGAAGCTTGAGCCTGTTTCTGCTTTTGATTATCGTGCAATATTACTTCCTCTAGTGAAGTCGCACCTAAGGGCACGTTTGGAAGATTTGGCTGAGAAAGACGCAACGGAGAAGTCTGATGCAGCACGAGAAGCATTTTTGGCTGAGCTTGCTCTTGATTCAAAGAGGGGCTCTAAAGGGGGAAGTGATAGTGCGAAACATATGGAGAAAACAAAAGATAAGAAGAAAAATAAAGAAAACAGAAAAACAAGGGATTTGAAGGCTACATATGGTCATGAGCCGCACAATGTTGACACCACTACTCCCGATTCCTATTCCCTTGAGCGTGATAAGGACCATGATTCCATTCCTGTTTCTACGATTAGTGTTGACTTGGAACAACAGGAAGAGGAAGTTAGACGTAAAATTGAGTTAGAAGAAGAGGAAAAAAAACTTGAAGAAACTTTGGAGTTACAACGTCGAATAGAAAATGAGGCTAAACTGAAGCACCTTGCTGAGCAACAAAAAAAATCCTCTGGGACATATTTGGAGAAGCCGGCTGACAAAGTTCTGGATTGTCAATTAAAGGCCGTTGCTGATGGCCTAGAAAGACCGCCCATGCTGGAGCAGTTAGCAAATGAGAATGCTTACCCTCGCAATTTAGATGGTGTGCTTATTGCCACATCAAATGGTTCTGCAGTTCCAAACAAATCTTTACTTGATTCAGTGAATCAAACGATTCATCATATGGACCCATCAAATATTAGGCAAGATCTGTCTAACAAAGTAGTTCCTGAGAATGGTTTTCACTTGGCTGAGCCGCGTACAGGGAAAAAGGGTAAACGCCATAGAAATGCTTCCAGGTTGGCTGATGGAAAGTTTGAGGCTGTCTCATCGGATAAAGAGAATGTTGGTGCACATGCTGATAACCATTTAAGAGAGCATGTTAAATTCCACAGCAATCAGGATGCTAACGACGTGCAAGGAGACAATGAATCAATGACTCTGAAAGAGTTGCAAGTGGAGCATGATGAGGAGGAAAGGTTCCAAGCTGACCTAAAAATAGCTGTACGCCAAAGTCTGGACACATATCAAGCTCTTCAAAAATTGCCTCCAGATTCTAGATTGAGAACGCCAGATAGAGCTTCTTCGCAAGTAGATAATTTTGGTGCTCCACTGGAGGAGAACACAACTGAGAATGTCAATGGAGGTAGTTTGCTTGGTGCCGGGTTGAAGAATGAAGTGGGTGAATATAATTGCTTTCTCAATGTTATAATACAATCTTTGTGGCATTTGCAACGTTTTCGTGAGGAGTTTCTTAGCAGATCAAGATCAGAGCATGATCATGTGGGTAATCCTTGCGTTGTGTGTGCATTGTATGATATCTTCGCTGCCATGGGAATTGCGTCAAAGGATTGCAGGGGAGAAGCTGTAGCCCCTACTTCTCTGAGAATAGCTCTAAGCAATCTATGTCCAGATAGTAACTTCTTTCAGGAGGCTCAGATGAATGATGCTTCTGAAGTACTGGCAGTGGTATTTGACTGCCTTCACCGATCATTTACTCGTGGTTCAAGTGTTTCTGATACAGAATCAGTGGAAAGCAACTCCATGGGATCTTGGGATTGTGCAAACAGTAGTTGTATAGCACATTCACTCTTTGGAATGGATATTTTTGAACGGATGAACTGCCATCACTGTGGTCTTGAGTCCAGGCATCTGAAGTATACTTCCTTCTTCCATAATATAAATGCCAACTCCCTTCGGACCATGAAGGTAATGTGTAGTGAAAGCTCCTTTGATGAGCTTTTGAATGTAGTGGAGATGAATCATCAGTTAGCTTGTGATCCAGAAGCTGGCGGCTGTGGCAAGCTAAATTACATCCATCATTTTCTTTCAAAACCACCTCATGTTTTCACAACTGTTCTAGGTTGGCAAAATACATGCGAGAGTGCTGATGATATTAAAGCAACTTTGGCAACGCTGAGCACCAAGATGGACGTCAGTGTTCTTTATCGTGGGTTAGACCCAAAAAGCATTCATAGCTTGGTTTCCGTGGTATGCTACTATGGGCAACACTATCATTGCTTTGCTTATAGCCATGAACATGAGCAATGGATTATGTATGATGATAAGACAGTCAAGATAATTGGTGGGTGGCTTGATGTTCTTGCAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGATGTAAACTAA 4905 0.4294 MGHKKRNPAPRSKQSVAASPVTQSAIGGAANGPTSAESELCMSSNDTIQSATKIELSPQPEPSVYSTIKLECERALNALRRGNHTKALRLMKESCSRHDGSAYSALIHRVQGTVCVKVASIIDDPSAKQRHLKNAIESARRAVELSPSSVEFAHFYANLLYEAANDSTEYEQVVKECERALGIPNPIDPAKESLQDESQQKISTPDARIAHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRATEDPMEARLVQTRRPNEIKKVTKTPDERRKEIEVRVAAARLLQQKSESPQSQNQGERDGRTVDSSSGSGQRISERRKHGHVRKAGSTSERRDWVRLYWNLMSIDLKREFLRIRVCDLKSHFGSSKDALLNDIVAEALSYAEANKTWRFWLCCRCGEKFSDSESHMQHVVQEHMGNLLPKMQRLLPQNVDNEWIELISKCSWKPLDACAAVKMLESQAKCDDFSFPEDSYVDHIEEHHDCFKDSNYFLPKRGHDLGSCTPDRSNCYKSEETGIADGVEVERSVAYSHSDGWPLSDDSERAKLLEKIHAVLDMLIRHKYLAASHLGKVIQFTMDEIQGLAAGSQLLNHGLDQSPTCICFLGAPQLKKILKFLQELSHACGLGRYVDKSISPMDDLHNSNQIPEIKEKIVLNGDASCLLLDECLVPAEITPSATKSAALDDVTTPTSNDVASHTDPFLSWIFSGSSCGDQLTLWMRTKEDKRCQGMELVQTLEKEFYHLQSLSEKKCERMNYEEALQVVEDLCLEEGKKRENFTKFVQQSYGSVLRKRREELIESENDVMYVGNRFELDAITNVLQEAEAMNVNQFGYEENYTGVCDVESGEDDEWRMKDYLHQMDSYIEIAIQKLKENLSVELSKIDARIMRNVTEMQQLELKLEPVSAFDYRAILLPLVKSHLRARLEDLAEKDATEKSDAAREAFLAELALDSKRGSKGGSDSAKHMEKTKDKKKNKENRKTRDLKATYGHEPHNVDTTTPDSYSLERDKDHDSIPVSTISVDLEQQEEEVRRKIELEEEEKKLEETLELQRRIENEAKLKHLAEQQKKSSGTYLEKPADKVLDCQLKAVADGLERPPMLEQLANENAYPRNLDGVLIATSNGSAVPNKSLLDSVNQTIHHMDPSNIRQDLSNKVVPENGFHLAEPRTGKKGKRHRNASRLADGKFEAVSSDKENVGAHADNHLREHVKFHSNQDANDVQGDNESMTLKELQVEHDEEERFQADLKIAVRQSLDTYQALQKLPPDSRLRTPDRASSQVDNFGAPLEENTTENVNGGSLLGAGLKNEVGEYNCFLNVIIQSLWHLQRFREEFLSRSRSEHDHVGNPCVVCALYDIFAAMGIASKDCRGEAVAPTSLRIALSNLCPDSNFFQEAQMNDASEVLAVVFDCLHRSFTRGSSVSDTESVESNSMGSWDCANSSCIAHSLFGMDIFERMNCHHCGLESRHLKYTSFFHNINANSLRTMKVMCSESSFDELLNVVEMNHQLACDPEAGGCGKLNYIHHFLSKPPHVFTTVLGWQNTCESADDIKATLATLSTKMDVSVLYRGLDPKSIHSLVSVVCYYGQHYHCFAYSHEHEQWIMYDDKTVKIIGGWLDVLAMCERGHLQPQVLFFEDVN 1634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00029 1634 ProSitePatterns Zinc finger C2H2 type domain signature. 401 422 IPR013087 -
Pral1231g00029 1634 MobiDBLite consensus disorder prediction 291 335 - -
Pral1231g00029 1634 Pfam Ubiquitin carboxyl-terminal hydrolase 1310 1608 IPR001394 GO:0004843|GO:0016579
Pral1231g00029 1634 Coils Coil 749 769 - -
Pral1231g00029 1634 CDD Peptidase_C19 1392 1631 - -
Pral1231g00029 1634 Gene3D Cysteine proteinases 1284 1632 - -
Pral1231g00029 1634 Coils Coil 1021 1057 - -
Pral1231g00029 1634 SUPERFAMILY Cysteine proteinases 1301 1616 IPR038765 -
Pral1231g00029 1634 MobiDBLite consensus disorder prediction 954 1015 - -
Pral1231g00029 1634 MobiDBLite consensus disorder prediction 293 319 - -
Pral1231g00029 1634 MobiDBLite consensus disorder prediction 1 41 - -
Pral1231g00029 1634 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1633 - -
Pral1231g00029 1634 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1301 1633 IPR028889 -
Pral1231g00029 1634 Pfam Protein of unknown function (DUF627) 74 183 IPR006866 -
Pral1231g00029 1634 Gene3D Tetratricopeptide repeat domain 54 220 IPR011990 GO:0005515
Pral1231g00029 1634 MobiDBLite consensus disorder prediction 12 41 - -
Pral1231g00029 1634 Pfam Protein of unknown function (DUF629) 344 867 IPR006865 -
Pral1231g00029 1634 MobiDBLite consensus disorder prediction 958 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00029 Pral-Chr1231 128141 137296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00029 60 1631 C2H2 Transcription Factor Family AT3G47890 57.661 0.0 1751