Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00021 ATGAGAAGGGTTACCGTTGCCTCGGTTTTTCTGGTGATTTCCGTCATCGTTTTCTACCCTTCCTCTTTTGCGCTCACTCAAGATGGTCTTGTGTTGTTGGAAATCAAAAGCGCTTTGAACGATACTAGGAATTATCTCAGCAACTGGCAAGATTTTGATGAGTCTCCATGTACATGGACCGGTATCACTTGTTATCCCGGCGAACAACGAGTTCGCTCAATAAATCTGCCCTTCATGCAACTCGGAGGTAGTATCTCTCCCAGCATTGGCAAACTCAGTGGACTACAGAGATTGGCATTGCATCAGAACAGCTTACATGGAACTATTCCTCCTGAAATTACCAATTGTACTGAGCTAAGAGCATTGTACCTGAGGGCTAACTATTTACAAGGTGGCATACCATCAAATATTGGAAACCTTTCCTATTTAACCATATTGGATTTATCCAGCAATTCTTTGAAGGGTGCTATACCTTCATCCATTGGCCGCCTAACACATTTGCGACTCTTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCACCTTTGGAAACAACTCGTTTACAGGAAACTTGGATCTTTGTGGGAGGCAAGTCAATAAACCTTGTCGAACGTCGCTTGGCTTCCCTGTGGTGTTACCACATGCTGCAAGTGATGAAGCTACAGTTCCTCCTCCCAAAAGATCTTCACATTACACGAAGGTGCTGCTAATTGGTGCCATGTCAGCGTTGGCCCTTGCACTTGTGATAATGGTCTCATTCCTCTGGACTTGTATGCTGTCAAAGCAGGAAAGAGCTGCTCGGAGATACAAAAACATTAAGAAGCATTTCGATCCAGAATCAAGCACAAAGCTTATGACCTTCCATGGGGATCTGCCATACCCATCATCCACCCTCATTGAAAAGCTGGACTCTCTTGATGAAAAGGATGAAGTAGGGTCTGGAGGGTTGGGTACTGTCTACAGAATGGTCATGAATGATTCAGCAACATTTGCGGTTAAGAGGATGGACAGAAATCATGTTGGATCCGAGCAGGTTTTTGAGAGGAACTTGGAGATTTTGGGCAGCGTAGCGCACATAAATCTAGTGCATCTGCGTGGTTACTGCAAGATTCCTTCTTCAAAGTTCCTTATCTATGATTATTTTGCCGTGGGCAGCTTAGATTTTCTATTGCATGAAAATGGTGGAGAACAATTCTTGAATTGGAGTGCTCGTTTGAAAATAGCCCTTGGTTCTGCCAGGGGTTTGGCATATTTGCACCATGAATGCTCTCCAAAAATTGTGCACAGCAACATAAAATCCAGCAACATCCTGCTTGATGAAAACTTGGAGCCTCGTGTCTCTGATTTTGGCCTTTCAAAGCTCTTGGCTGACAAGGATACCAATGTTACCACTGTGGTTGCTGGCACTTTTGGCTACATGGCACCAGAGTATCTTCAAAATGGGAGAGCTACAATGAAGTCAGATGTGTATAGTTTTGGAGTATTATTGCTAGAACTTGTGACTGGAAAGAGACCAACAGATACTTACTTTGCGAAGCAGGGACTAAACGTTGTCGGATGGATGAACATGTTGCTGAGAGAGAAGCGGATGGAGCAATTGATTGACAGAAGATGCTGTAGAGATGCAGATGCAGCAAGTGTTGAAGCAATGATTGACGTGGCAGCAAGATGCACAGAAGGTAATCCAGACGAGCGTCCATCAATGAAGCAGGTATTACAGTTGCTGGAACAAGAAATTGTTATGTCTCCTTCCTCAAGTGACTTCTATGAATCCCATTCTGAATCATAG 1812 0.4376 MRRVTVASVFLVISVIVFYPSSFALTQDGLVLLEIKSALNDTRNYLSNWQDFDESPCTWTGITCYPGEQRVRSINLPFMQLGGSISPSIGKLSGLQRLALHQNSLHGTIPPEITNCTELRALYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGAIPSSIGRLTHLRLLNLSTNFFSGEIPDIGVLSTFGNNSFTGNLDLCGRQVNKPCRTSLGFPVVLPHAASDEATVPPPKRSSHYTKVLLIGAMSALALALVIMVSFLWTCMLSKQERAARRYKNIKKHFDPESSTKLMTFHGDLPYPSSTLIEKLDSLDEKDEVGSGGLGTVYRMVMNDSATFAVKRMDRNHVGSEQVFERNLEILGSVAHINLVHLRGYCKIPSSKFLIYDYFAVGSLDFLLHENGGEQFLNWSARLKIALGSARGLAYLHHECSPKIVHSNIKSSNILLDENLEPRVSDFGLSKLLADKDTNVTTVVAGTFGYMAPEYLQNGRATMKSDVYSFGVLLLELVTGKRPTDTYFAKQGLNVVGWMNMLLREKRMEQLIDRRCCRDADAASVEAMIDVAARCTEGNPDERPSMKQVLQLLEQEIVMSPSSSDFYESHSES 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00021 603 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 72 584 - -
Pral1231g00021 603 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Pral1231g00021 603 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 187 - -
Pral1231g00021 603 ProSiteProfiles Protein kinase domain profile. 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1231g00021 603 Pfam Leucine rich repeat 118 175 IPR001611 GO:0005515
Pral1231g00021 603 SUPERFAMILY L domain-like 25 204 - -
Pral1231g00021 603 SUPERFAMILY Protein kinase-like (PK-like) 293 584 IPR011009 -
Pral1231g00021 603 Gene3D Phosphorylase Kinase; domain 1 274 388 - -
Pral1231g00021 603 Pfam Protein kinase domain 315 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1231g00021 603 Gene3D Ribonuclease Inhibitor 26 212 IPR032675 -
Pral1231g00021 603 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 389 595 - -
Pral1231g00021 603 Gene3D Transferase(Phosphotransferase) domain 1 390 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00021 Pral-Chr1231 80072 83723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00021 1 591 Receptor kinase-like Gene Family AT2G35620 45.439 2.53e-177 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pral1231g00021 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00021 - - gmx:100803920 901.353