Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00003 ATGGAGTTTGCTCTGCGCAGATCTGGCCAAGAAGCTGAACCAGCCGAGGAAGAAAAGAGAAGTGAATCTACTGCTGCTCATAATCATGAAGCTCCTCCTCGTCTTAAACAAGATATTACTGTCGAGGTGCCGCCGATGAATACTACCGATAGATCCGTCGTGGACACTGGACCACCTCATGCATCCTCAGCCAAAAAAGAAGAGGTTGACGAACTTGAATCAGCAAGAGTTGAAATGGGTGAGGTAAGAGAAGAAAACCAAAGGCTGAAGATGTGTTTGGAGCGAATAATGAAGGAATACCAGGCTCTGCAAATGCAATTCCACGTTATAGCTCAACAGGAAGCTACGACGAAATCTGATCAAAAAGGAGATGTTGGTAACAATCAAGAGCCTGCTGAGGAATCGGATCTGGTTTCACTCAGTCTGGGAAGAGTTCCGGGTGGTAGTAGTAATCCAAAATCTGACGAAAAATCTAAAGTCATCAACCCCAAACCGTCATTACATTTACAGCGACAAGAGGGAGAAGAAGAAGAAGAATTCAAACAAGACTTGTCTCTTGGACTGGATTGCAAAGTTGAAACATCAAAATCTGGAAGCACGACTGAAGCTTTGCCAAATAATAATGCGAGCCCCACCAATAGCTCTGAATTAGTTCACAAGGAAGAAGAAGCTGGCGAGAGTTGGCCACCAAGCAAGGCACTTAAAACTCCCAGAGATCCCACAGATCAAGACGAAGTTTCCCAGCAAAATCCTGCTAAGAAGGCCAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTCTGAATGATGGATGCCAATGGAGGAAATATGGACAAAAAATATCGAAGGGAAATCCCTGTCCAAGAGCTTACTATCGTTGCACAGTTGCACCAAATTGCCCAGTAAGAAAGCAGGTGCAAAGATGTGTAGAGGACATGTCGGTTCTAATCACTACCTATGAAGGAAACCACAACCACCCTCTCCCGCTCTCTGCTACTGCTATGGCTTCCACCACTTCTGCAGCTGCTTCCATGCTCTTGTCAGGCTCTTCTTCAACCTCTAACCTCCCTGCCGGTTCAGCGCCGTCTGCAACGGCCTCGGCGACCACCGCCATTGGCTCTGATCTCCACGGCGTCAACTTCTACCTCTCAGATGGCTACAAACCAAAGCAATTCTACCTCTCCAATCCTGCACTATCACCTTCACCATCACACCCTACAATTACCCTCGACCTCACTTCCAATAATCCTTCCTCTTCAAATTATTTCTCGCCCCACTTCAACAGATTCAACTCAAACTACAATAACCCACCGAGATTCCCTTCTTCAGCCAGCCTCAGCTTCAGTTCCTCAGACTCCAACGCAATTTCATGGAGCAACAATGTGGGGTTCCTCGGTTACAACTACAACGCCCAACCATATAATAACAACAGGAACATCCTTAGCAGCATCAACCTCGGAAGACAACTACCGATTCAAACTCCTCCTCCTCCTACTGCTCCTCAAGTACATCAAAATCCTCCTTCACTACTGCCAGACACCATAGCTGCAGCAACTAAAGTGATCACAGCTGACCCAGCATTTCAGTCAGCTTTGGCTGCTGCACTTACTTCCATTATGGGCACAGGAAATTGTGGTAGTGTTAGTGGGAATAGCACACAAAGTGTTGGAGAAATCAACTTGGGTCAGAAAATTAACCCATGGGGAGATATTTTCGCAGCTTCTGCATCTGGGTCAGCTTCCAAAGTCAGTGGATGTGGTTCAAGCTTCTTGAGTAAAACGACGCCGTCCGGAACACAAGCAGGAAGTAGTGGTTTGATGTTTCTACCTCCATCTCTGCCATTTTCTAGCTCCAAGACCTCGTCGGCGTTATCTCCGGCTGATAATAGAAACAAGTCCAATTCCTGA 1908 0.4665 MEFALRRSGQEAEPAEEEKRSESTAAHNHEAPPRLKQDITVEVPPMNTTDRSVVDTGPPHASSAKKEEVDELESARVEMGEVREENQRLKMCLERIMKEYQALQMQFHVIAQQEATTKSDQKGDVGNNQEPAEESDLVSLSLGRVPGGSSNPKSDEKSKVINPKPSLHLQRQEGEEEEEFKQDLSLGLDCKVETSKSGSTTEALPNNNASPTNSSELVHKEEEAGESWPPSKALKTPRDPTDQDEVSQQNPAKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPNCPVRKQVQRCVEDMSVLITTYEGNHNHPLPLSATAMASTTSAAASMLLSGSSSTSNLPAGSAPSATASATTAIGSDLHGVNFYLSDGYKPKQFYLSNPALSPSPSHPTITLDLTSNNPSSSNYFSPHFNRFNSNYNNPPRFPSSASLSFSSSDSNAISWSNNVGFLGYNYNAQPYNNNRNILSSINLGRQLPIQTPPPPTAPQVHQNPPSLLPDTIAAATKVITADPAFQSALAAALTSIMGTGNCGSVSGNSTQSVGEINLGQKINPWGDIFAASASGSASKVSGCGSSFLSKTTPSGTQAGSSGLMFLPPSLPFSSSKTSSALSPADNRNKSNS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00003 635 SMART WRKY_cls 268 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1231g00003 635 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 38 555 IPR044810 GO:0003700
Pral1231g00003 635 Gene3D WRKY domain 252 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1231g00003 635 MobiDBLite consensus disorder prediction 114 135 - -
Pral1231g00003 635 MobiDBLite consensus disorder prediction 114 254 - -
Pral1231g00003 635 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1231g00003 635 MobiDBLite consensus disorder prediction 42 56 - -
Pral1231g00003 635 MobiDBLite consensus disorder prediction 192 215 - -
Pral1231g00003 635 MobiDBLite consensus disorder prediction 1 85 - -
Pral1231g00003 635 MobiDBLite consensus disorder prediction 169 186 - -
Pral1231g00003 635 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1231g00003 635 FunFam probable WRKY transcription factor 31 253 330 - -
Pral1231g00003 635 MobiDBLite consensus disorder prediction 1 36 - -
Pral1231g00003 635 CDD bZIP 65 99 - -
Pral1231g00003 635 Coils Coil 65 106 - -
Pral1231g00003 635 Pfam WRKY DNA -binding domain 269 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1231g00003 635 MobiDBLite consensus disorder prediction 61 85 - -
Pral1231g00003 635 MobiDBLite consensus disorder prediction 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00003 Pral-Chr1231 27997 31651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00003 79 542 WRKY Transcription Factor Family AT5G15130 40.702 6.39e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral1231g00003 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00003 - - gmx:100804403 563.148