Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1228g00006 ATGGGTTCACAAACAGAGATGGAGCATCCCCTGAAGGCTTTCGGATGGGCTGCTAGGGACACGTCCGGAGTTCTCTCTCCCTTCCACTTCTCTAGAAGGTCCCTCGCTTCCTTCTTTCATGTATTTGATTCTTTGATTAGGTTCTGTAGAATATGTTTCATTACCTTGGATGTATCAAAATTACTGGGGACGAGAGATCCTTCTTCTGATCAATCTAAATGTTGTTGCAGGAAAACCGGAGAGAAAGATGTGGTGTTCAAAGTGATGTACTGCGGGATTTGCCACTCGGATCTCCACATGCTTAAGAATGAGTGGGGCACTTCCATCTATCCACTAGTACCCGGGCATGAAATTGTTGGTGAAGTAACAGAGGTGGGAAGCAAGGTTGAGAAGTTCAAAGTTGGAGACAAGGTAGGTGTGGGATGCATGGTTGGTTCTTGCGGCTCGTGCAAAAACTGTACTGAAAATCTTGAAAATTACTGCCCAAAAATGATTCTCACATATGGTGTCAAGTATGTGGATGGAACTATCACATATGGAGGCTACTCTGACTTGATGGTTGCAGATGAACAGTTTGTGGTTCGCATTCCAGACGGCTTTCCTCTTGATTCTGCTGCTCCTCTGCTTTGTGCTGGGATCACTGTGTACAGTCCTTTGAGGTACTTTGGACTGGACAAGCCTGGTTTACATGTTGGTGTGGTTGGTATTGGTGGTTTAGGCCATATGGCTGTGAAGTTTGCCAAGGCCTTTGGCGCTAAAGTGACAGTAATAAGTACATCACCTAATAAGAAAGAGGAAGCATTAAGAAATCTAGGAGCTGATTCCTTTGTGGTCAGTCGGGAGCAAGATCAGATGCAGGCTTTAACGGGTACCTTCGATGGTATCATTGACACTGTTTCTGCTGTTCATCCTCTCTTGCCTTTGATTGATCTGTTGAAATCTCATGGGAAACTCGTTATGGTCGGTGCCCCAGAGAAGCCTTTAGAACTCCCAGTCTTTCCTCTACTCATGGGGAGGAAGTTGGTGGCTGGGAGTGCCATTGGAGGGATGGAGGAGACACAAGAAATGATTGATTTTGCTGCTAAGCACAACGTGAAGCCTGACATTGAGGTTGTTCCAATTGACTACGTGAACAAGGCAATGAAGCGTCTCGAGAAATCAGATGTCAAGTATCGATTTGTTATCAATATTGGGGAGACACTGAAACCAAGCTCTTAA 1218 0.4524 MGSQTEMEHPLKAFGWAARDTSGVLSPFHFSRRSLASFFHVFDSLIRFCRICFITLDVSKLLGTRDPSSDQSKCCCRKTGEKDVVFKVMYCGICHSDLHMLKNEWGTSIYPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCMVGSCGSCKNCTENLENYCPKMILTYGVKYVDGTITYGGYSDLMVADEQFVVRIPDGFPLDSAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGIGGLGHMAVKFAKAFGAKVTVISTSPNKKEEALRNLGADSFVVSREQDQMQALTGTFDGIIDTVSAVHPLLPLIDLLKSHGKLVMVGAPEKPLELPVFPLLMGRKLVAGSAIGGMEETQEMIDFAAKHNVKPDIEVVPIDYVNKAMKRLEKSDVKYRFVINIGETLKPSS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1228g00006 405 Pfam Alcohol dehydrogenase GroES-like domain 82 195 IPR013154 -
Pral1228g00006 405 FunFam Uncharacterized protein 62 210 - -
Pral1228g00006 405 SUPERFAMILY GroES-like 78 228 IPR011032 -
Pral1228g00006 405 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 115 129 IPR002328 GO:0008270|GO:0016491
Pral1228g00006 405 PANTHER ALDEHYDE REDUCTASE 6 400 IPR047109 GO:0016616
Pral1228g00006 405 FunFam Cinnamyl alcohol dehydrogenase 211 367 - -
Pral1228g00006 405 Gene3D - 211 367 - -
Pral1228g00006 405 CDD CAD1 14 395 IPR047109 GO:0016616
Pral1228g00006 405 Gene3D - 75 396 - -
Pral1228g00006 405 FunFam Putative cinnamyl alcohol dehydrogenase 6 368 397 - -
Pral1228g00006 405 Pfam Zinc-binding dehydrogenase 238 361 IPR013149 -
Pral1228g00006 405 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 201 366 IPR036291 -
Pral1228g00006 405 SMART PKS_ER_names_mod 63 395 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1228g00006 Pral-Chr1228 30937 33146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1228g00006 12 404 Monolignol Biosynthesis Gene Families AT4G37990 63.613 1.05e-166 469