Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1228g00003 ATGATAAAGAACGAGTGGAGCAATTCCATCTATCCACTTGTACCCGGGCATGAAATTGTTGGTGAAGTAACAGAGGTGGGAAGCAAGGTTGAGAAGTTTAAAGTTGGGGACAGGGTAGGTGTGGGATGCATGGTTGGTTCATGCGGCTCATGCCAAAGCTGTACTGAAAATCTTGAAAATTACTGCCCAAAAATGATCCTCACATATGCCGCCAAGTATGTGGATGATACCATCACATATGGAGGCTACTCTGACTCGATGGTTGCGGATGAGCACTTTGTGGTTCGCATTCCAGACAGCCTTCCTCTTGATGCTGCCGCTCCTCTGCTTTGTGCTGGGATCACTGTGTATAGTCCTTTGAAGTATTTTGGACTGGACAAGCCTGGTCTGCATATCGGTGTGGTTGGTCTTGGTGGTTTAGGCCATTTGGCTGTGAAGTTTGCCAAGGCCTTCGGTGCTAAGGTGACAGTAATAAGTACATCACCTAATAAGAAGGAGGAAGCATTAAAAAATCTGGGAGCTGACTCCTTTGTGGTCAGCCGGGAGCAAGATCAGATGCAGGCTGTAATGGGTACCTTTGATGGTATCATTGACACTGTTTCTGCTGTCCATCCTCTCTTGCCTTTGATTGGTCTGTTGAAATCTCACGGGAAACTCGTTATGGTCGGTGCCCCAGAGAAGCCTCTTGAACTCCCAGTCTTTCCTTTGCTTTTGGGGAGAAAATTGGTGGCTGGGAGTGCCTTTGGAGGAATGAAGGAGACACAAGAAATGGTTGATTTTGCTGCTAAGCACAATGTTAAGCCAGAAATAGAGGTGGTTCCAATTGACTATGTGAACAAGGCAATGGAGCGTCTCGCGAAAGCAGATGTCAAGTATCGATTTGTCATTAACATTGGAGAAACACTGAAGCCAAGCTCTTAA 921 0.4636 MIKNEWSNSIYPLVPGHEIVGEVTEVGSKVEKFKVGDRVGVGCMVGSCGSCQSCTENLENYCPKMILTYAAKYVDDTITYGGYSDSMVADEHFVVRIPDSLPLDAAAPLLCAGITVYSPLKYFGLDKPGLHIGVVGLGGLGHLAVKFAKAFGAKVTVISTSPNKKEEALKNLGADSFVVSREQDQMQAVMGTFDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLLGRKLVAGSAFGGMKETQEMVDFAAKHNVKPEIEVVPIDYVNKAMERLAKADVKYRFVINIGETLKPSS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1228g00003 306 SUPERFAMILY GroES-like 2 129 IPR011032 -
Pral1228g00003 306 SMART PKS_ER_names_mod 3 296 IPR020843 GO:0016491
Pral1228g00003 306 Gene3D - 112 268 - -
Pral1228g00003 306 PANTHER ALDEHYDE REDUCTASE 1 301 IPR047109 GO:0016616
Pral1228g00003 306 Pfam Zinc-binding dehydrogenase 139 262 IPR013149 -
Pral1228g00003 306 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 16 30 IPR002328 GO:0008270|GO:0016491
Pral1228g00003 306 Pfam Alcohol dehydrogenase GroES-like domain 4 96 IPR013154 -
Pral1228g00003 306 CDD CAD1 1 296 IPR047109 GO:0016616
Pral1228g00003 306 Gene3D - 1 297 - -
Pral1228g00003 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 267 IPR036291 -
Pral1228g00003 306 FunFam Cinnamyl alcohol dehydrogenase 112 268 - -
Pral1228g00003 306 FunFam Putative cinnamyl alcohol dehydrogenase 6 269 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1228g00003 Pral-Chr1228 23247 28713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1228g00003 1 305 Monolignol Biosynthesis Gene Families AT4G37990 72.131 4.94e-149 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1228g00003 K23232 - gmx:100809071 507.679