Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1224g00005 ATGGGTTTTCGTTTACCAGGAATTAGGAGGATTTCCTTCGCTGCAAAAGTGAGTTCTGCAAAATTTGGTGAAGTGCCAAAGGGATATCTTGCAATAAATGTCGGAGAGGAAATGAAGAGATTTGTGATCCCCATATCATACTTGAATCAGCCTTCTTTTCAAGAATTGTTAAGTGAAGCTGAAGAAGAATTTGGGCATGATCATCCCATGGGTGCCCTTACTATTCCTTGCACAGAAGACGTCTTCCTGAAAGTCATTGCTTGCCTCAATGGGTGCTAG 279 0.4194 MGFRLPGIRRISFAAKVSSAKFGEVPKGYLAINVGEEMKRFVIPISYLNQPSFQELLSEAEEEFGHDHPMGALTIPCTEDVFLKVIACLNGC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1224g00005 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 88 IPR003676 GO:0009733
Pral1224g00005 92 Pfam Auxin responsive protein 9 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1224g00005 Pral-Chr1224 15212 15610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1224g00005 24 91 Calmodulin-binding Proteins AT3G43120 50.000 1.90e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1224g00005 K14488 - pcin:129286196 145.976