Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1224g00004 ATGGGTTTTCGATTGCCTGGAATTAGAAGGGCTTCATTTACTACAAAAGCGACTTCTTCAAGATCAAGTGAAGTACCAAAGGGATTTCTTGCAGTCTATGTGGGAGAGGAAATGAAGAGGTTTGTGATCCCAATATCATACTTGAATCAACCTTCATTTCAAGAGTTATTGAGCCAAGCCGAGGAAGAGTATGGATATGATCATCCAATGGGCGCTCTGACTATGCCTTGCAGAGAAGATATCTTCCTCAATGTCACTTCTTCTTTTTCGATAGGTGCTAGGTGA 285 0.414 MGFRLPGIRRASFTTKATSSRSSEVPKGFLAVYVGEEMKRFVIPISYLNQPSFQELLSQAEEEYGYDHPMGALTMPCREDIFLNVTSSFSIGAR 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1224g00004 94 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Pral1224g00004 94 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1224g00004 Pral-Chr1224 9862 16733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1224g00004 14 82 Calmodulin-binding Proteins AT3G43120 52.174 8.72e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1224g00004 K14488 - pcin:129286196 162.925