Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1223g00009 ATGCCGTTGGACAAAGTGACTATACTGGACGAAGCTATCAAATACATGAAACAACTTCAAGAACGTGTAAGAGAACTAGAGAAAGATCCATCACTGACAGCCGTAAAGAGAATTGAGTGTTGTGAGAATGACGACGACTTCTATGAGGTCAATGAAGAACTGCCTAAGATTGAGGTTAGAGTTGCAGAGAACCAAATGTTTATGGGAATCCATTGCGAGAAACAGAAGGGCATTGAGTTCAAAATATTGAGTTTGCTTGAGAATTTTCACCTCTCTGTCTCCAGTAGCAGCGTCTTGCCATTTGGAAAATCCACTCGTAGCATTACTATTATTGCGCAAGTAGCGATGTGCAAATAA 357 0.4062 MPLDKVTILDEAIKYMKQLQERVRELEKDPSLTAVKRIECCENDDDFYEVNEELPKIEVRVAENQMFMGIHCEKQKGIEFKILSLLENFHLSVSSSSVLPFGKSTRSITIIAQVAMCK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1223g00009 118 PANTHER BHLH TRANSCRIPTION FACTOR 4 114 - -
Pral1223g00009 118 Gene3D - 1 39 IPR036638 GO:0046983
Pral1223g00009 118 Coils Coil 9 29 - -
Pral1223g00009 118 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 33 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1223g00009 Pral-Chr1223 70966 71322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1223g00009 4 114 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 40.476 3.41e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1223g00009 - - pcin:129287632 136.346