Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1223g00006 ATGGAGCTTCTGGCATTTACCAGCTTTGAGGCAATTTCTAAGGTTTCATTATTCCCCTTTTCTTCCAAACAAGTTTTGTATGGAAACTCTGTTCGTTGCCGGAACATTGGGTTCCTATGGTGTCGAAATTCGAAATCTTTTGCTGGAATCACCATGAGTTCAGATGAAGATTCCTTATCAAATGATTATGGACTAAGACAGAGCCTTGGAACTAAATCTGGAGCTATCGACGTGATTGGCATTGGCAGCAGAAAGGACGCAGTTCTAGATTTCTGCTTAAAGTCGCCTTTTCAGCTATCGTCGCTGCGATTTTGGAATATTCTCATGAAGGAATCTCAAGAGGTTCAATTACAACTAAGGTCTTATGAAGAAGATTCTCTTCCAAGAATTGTCAAAGCTCCATTATTTATGAAGTCATGCTCATCGACTATTATTCTTGTAGCTAGTGCAGGATATGGATCAGACCACTCTGTTGCAATTGATGTTTTCAAAACTATAAAGTCATCAAATGGATTAACTGTTGCTATTATCTTGAAGCCTTTTGTCTTTGAAGGGTTGAGGCGACAAGATGAGGTCAAAAATTTGGTAGAGAAACTAAAGGAGAACACAGATTTACTTCTTGAAATTGATATTGATTCACTACTTAAAAAGGACTTGGTGACTCTAGATGAAGCTATGAAAACTGCAAATGATGCGGTTTTGTTGGCCATTAATGCCATATCTGTTCTCAAATCCGAGATGCACAGGAAACTTACAGATGGTCTGGACACTGGTGGCATGAAAGAAGTCAGTAATTTGGAAATTAATAAAATATTTGAAAGCTATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGAAAACTTCAATTCTACAGTCTTTATTTGATTGTCCTTTCCTTGGTGTTAGTTTGAAGGACTCAAATGGCATGATTATATGCAATCTCACAAGTTCAGTTCATATGAATGACAATGATATCGCTGCCTTTCTGCATACTTTCCGTCAAACAACAGGATACACAAAGGAAATAATAATAACTACAGATCATGAGCCTAATCTTGAGCCAAACCTGCTGATCACCACTGTTCTTACACTGGGCATTAATATGCAACAGCGTTCCCAGAGTGGTGGCATGTTTTCTAGACTGGCCCAGCATTTTCCTCTTCTTTGCCGCTTTTGGGGGGGACATCAAAATGAACCAGCTGACTCTAGGAAAGAGAATTTAACTGGAAGTATAGCTCCTTCTCAAGTGACTAAATTATATGAATTTAATGATGGGGATAGAATTGCTTCTGATGAGATAGATGAGAAGTTTGATAAGGATTTTGAATCTCTGGAGCCAACTGTGGGTAATAAAACTGTGAAGTCAAACGAATCAAGGCGTTCTGAACAAAACAAGGGAGAACAATTTGACACAAGTTCCGAGTGTTCCAGCCTTAACGATGAAATTACTAGAGGCGACTCTGCTTGTCGAAGGGAGAAACTCATAAATTGGAATCTTGGTCCTGGATATGAGGTTGCACAGGAGTGGGCCAAACAAAGGGCAGCTGATGCTACTACTCCAACAGCTGATAATATTAGCATCTTCAACCTTCCTGTTGGTATCAGATCTTCAGAACAGTTAAAAGACTGTCCAGAAGTCTCTGCGGCACAAGAGCCAGCGACTGAAAACGATGTCAAAGTACCTAACAAAAGCATGTCCTGGAGTGCATTGACTGATGCAGGTCTGGAAGTAGTGGTGGATTTTACATCTACTCTTTTAAATGGAAAGTATGCAGACAAATCAAACCAGCAAGGGGTTCTTTCTGTTCGAGCAGCATCCATGCTGGAAGCAGAACGTGATTCATCCAAAAAATGGATCCCACTTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGACTTGTCCTCAGAGATGGAAGTATATATGATGGTACATGGCGCTATGGTAAGAGATCAGGTCCTGGCACATTGTATTTCATCAATGGCGACGTGTTCCAAGGATCGTGGAGGGACGATCTCATGCACGGCAAAGGTTGGTTTTATTTTCACACACGGGATAGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCAAATGGTGAAGGCCGTTTCTACACAAAGAATGGGGATGCCTTCTTTGGAAATTTTAAAGATGGATGGCGACACGGGCAATTTCTATGCATCAATGCAAAAGGAAGAAGGTATATTGAGATTTGGGAATATGGTGTTATTGTAGAAAGCAAGCATTTAGACAAAGATGACGTTCAGGTCAAAAAAGACAAAGATGACGGAGAAGAATGA 2343 0.4059 MELLAFTSFEAISKVSLFPFSSKQVLYGNSVRCRNIGFLWCRNSKSFAGITMSSDEDSLSNDYGLRQSLGTKSGAIDVIGIGSRKDAVLDFCLKSPFQLSSLRFWNILMKESQEVQLQLRSYEEDSLPRIVKAPLFMKSCSSTIILVASAGYGSDHSVAIDVFKTIKSSNGLTVAIILKPFVFEGLRRQDEVKNLVEKLKENTDLLLEIDIDSLLKKDLVTLDEAMKTANDAVLLAINAISVLKSEMHRKLTDGLDTGGMKEVSNLEINKIFESYKEARIGFGAAYNMKTSILQSLFDCPFLGVSLKDSNGMIICNLTSSVHMNDNDIAAFLHTFRQTTGYTKEIIITTDHEPNLEPNLLITTVLTLGINMQQRSQSGGMFSRLAQHFPLLCRFWGGHQNEPADSRKENLTGSIAPSQVTKLYEFNDGDRIASDEIDEKFDKDFESLEPTVGNKTVKSNESRRSEQNKGEQFDTSSECSSLNDEITRGDSACRREKLINWNLGPGYEVAQEWAKQRAADATTPTADNISIFNLPVGIRSSEQLKDCPEVSAAQEPATENDVKVPNKSMSWSALTDAGLEVVVDFTSTLLNGKYADKSNQQGVLSVRAASMLEAERDSSKKWIPLVEMQYRGGQYKGRCQGGLPEGKGRLVLRDGSIYDGTWRYGKRSGPGTLYFINGDVFQGSWRDDLMHGKGWFYFHTRDRWFANFWKGKANGEGRFYTKNGDAFFGNFKDGWRHGQFLCINAKGRRYIEIWEYGVIVESKHLDKDDVQVKKDKDDGEE 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1223g00006 780 SUPERFAMILY Tubulin nucleotide-binding domain-like 76 242 IPR036525 -
Pral1223g00006 780 Gene3D - 706 777 - -
Pral1223g00006 780 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 631 758 - -
Pral1223g00006 780 Gene3D - 629 705 - -
Pral1223g00006 780 SMART morn 655 676 IPR003409 -
Pral1223g00006 780 SMART morn 632 653 IPR003409 -
Pral1223g00006 780 SMART morn 724 745 IPR003409 -
Pral1223g00006 780 SMART morn 678 699 IPR003409 -
Pral1223g00006 780 MobiDBLite consensus disorder prediction 442 485 - -
Pral1223g00006 780 MobiDBLite consensus disorder prediction 471 485 - -
Pral1223g00006 780 Pfam MORN repeat 707 724 IPR003409 -
Pral1223g00006 780 Pfam MORN repeat 680 699 IPR003409 -
Pral1223g00006 780 Pfam MORN repeat 639 655 IPR003409 -
Pral1223g00006 780 Pfam MORN repeat 657 679 IPR003409 -
Pral1223g00006 780 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 100 769 - -
Pral1223g00006 780 Gene3D Tubulin/FtsZ, GTPase domain 110 369 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1223g00006 Pral-Chr1223 34692 45594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1223g00006 1 768 PP2C-type Phosphatase Gene Family AT1G75010 43.540 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1223g00006 - - gsj:114371951 959.903