Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1219g00001 ATGGCCGCTGCCCTGGAGTGTTGGTCGAGCCGTGCCAGTACGGACGAGGAAATGGTGGAGCAGGTCCTGATGAGGACGCAGCATAGATCCGAGGGCGAAACGACGTCGGAGAGCTCTTCTACTGCTGGTGGACCGAAGGAGACCTCGCAGATGCAGAAGAAATTGCAGAAGCTGAGTCGCAACGTTACTGAAGCTATAGCGTCGTTCAAAAACTCGCTCAATCTGGATTCTGCTCGTGACCCAGCGCCTCCTTCGAAGGTGGATAGTTCTCGCAAAGTTGTGTGGGGAAGTGTCGTCCGGAATCTCACTCAGCTTTATCCTGGTAGCCAGCTGCCGGAGAAGCTCATGTCCAATATTCGCAAGCATTACGATTCGTTGCCTCTCAGCTATGCTCAGGTTGGATTTGATATGAAAGATGTATTTCTGCACATCAAGTTGATGGAGCAAGCATCAGTAGATGATCAGCCTGCAATCCTGATCCAAGAAGAACCAGATAATGAAATTCAAGGGTGTATATATAAGCTGACTTTTGCTTGCAACTCTCCAATTTCATGGCCCTCAATGTCCAGTGCACTGGATAGTTCATGCATTTGCTGCAAGAAGATACAGATCTTTGAGAAAAAAAGTTTCACCCTTGGCATTGTCCTTCTTCTTGTTCAGCCTGGGCAAGATAAATTGATCAGAGTTCGAGTTGAGAATGCTCTGAAATTTGCAATGAAGAAGCCCAAAACCAGTGCAGTGAAGCTTCCTTTTGGCCTTTGCGGATGTCAAGAAGAGAATTCCAAAGGGAGAGAACTTGGAGAGATTGAAGAAGATAGTGGCGATGCATATTATGGAAACGGTTTTGAGAATTCTAGCCAAAAAGTTCAGCTACAGGTACCATTACCTACTTCCTCTTTTATTGTATCCGTAGATGAATGGCAGACAATTCAGTCTGGTGGGGAAGAGATCAAAAAATGGCTATTGAACTCAGATAGTCTTGAGTTTGTAGAACAGACTGGACCCAATTCATATAAAGGGGTCCACATGGGTAGAAGGGTTGGAATCGAGAAGCTTAAAGGGTGTGATAAAGGAAATTCTTATCAGTTTGAGCTCCGTCAAGATCTGCTAGAACTGATGACTTGTGGCCACAAAAAGATTCTGCAATTTTGCGGTGTTTCTGTGGATGAAAATCATGGGTTATGTGTAGTGACGAAGTTCATGGAAGGTGGTTCAGTTCATGATTTGATGCTAAAGAACAAGAAGCTCCAGATAAAGGAAATCATTAGAATTGCTGTTGATGTGGCTGAGGGCATCAAGTTTATGAATGATCATGGTGTTGCATACAGGGACCTCAATACTCAGAGGATTCTATTGGATCGCCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACCGCTTGCAAAAATGTTGGCGAGGCAACAGAGTATGAAACTGATGGTTACCGGTGGCTGGCTCCAGAGATAATTGCAGGTGACCCAGAGTGTGTGACAGAGACATGGATGAGTAATGTTTACAGTTTTGGCATGTTCCTTTGGGAGATGGTTACTGGTGAAGCAGCCTATTCTTCATATTCACCAGTACAGGCGGCGGTGGGCATAGCTGCTTGCGGCCTCAGACCTGAGATCCCAAAGGACTGTCCTCAGAGTCTGAAAACCCTCATGACCAAGTGCTGGAACAATCAACCTTCAAAACGCCCTCAATTCTCTGAAATATTGGCTACACTCTTGCGTTCAAACAATACCAATAGGTAA 1758 0.4539 MAAALECWSSRASTDEEMVEQVLMRTQHRSEGETTSESSSTAGGPKETSQMQKKLQKLSRNVTEAIASFKNSLNLDSARDPAPPSKVDSSRKVVWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQVGFDMKDVFLHIKLMEQASVDDQPAILIQEEPDNEIQGCIYKLTFACNSPISWPSMSSALDSSCICCKKIQIFEKKSFTLGIVLLLVQPGQDKLIRVRVENALKFAMKKPKTSAVKLPFGLCGCQEENSKGRELGEIEEDSGDAYYGNGFENSSQKVQLQVPLPTSSFIVSVDEWQTIQSGGEEIKKWLLNSDSLEFVEQTGPNSYKGVHMGRRVGIEKLKGCDKGNSYQFELRQDLLELMTCGHKKILQFCGVSVDENHGLCVVTKFMEGGSVHDLMLKNKKLQIKEIIRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKNVGEATEYETDGYRWLAPEIIAGDPECVTETWMSNVYSFGMFLWEMVTGEAAYSSYSPVQAAVGIAACGLRPEIPKDCPQSLKTLMTKCWNNQPSKRPQFSEILATLLRSNNTNR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1219g00001 585 Gene3D Transferase(Phosphotransferase) domain 1 321 583 - -
Pral1219g00001 585 MobiDBLite consensus disorder prediction 1 53 - -
Pral1219g00001 585 ProSiteProfiles Protein kinase domain profile. 327 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1219g00001 585 Pfam Protein tyrosine and serine/threonine kinase 359 577 IPR001245 GO:0004672|GO:0006468
Pral1219g00001 585 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 85 577 - -
Pral1219g00001 585 SUPERFAMILY Protein kinase-like (PK-like) 336 577 IPR011009 -
Pral1219g00001 585 MobiDBLite consensus disorder prediction 33 53 - -
Pral1219g00001 585 PRINTS Tyrosine kinase catalytic domain signature 398 411 IPR001245 GO:0004672|GO:0006468
Pral1219g00001 585 PRINTS Tyrosine kinase catalytic domain signature 434 452 IPR001245 GO:0004672|GO:0006468
Pral1219g00001 585 PRINTS Tyrosine kinase catalytic domain signature 548 570 IPR001245 GO:0004672|GO:0006468
Pral1219g00001 585 PRINTS Tyrosine kinase catalytic domain signature 504 526 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1219g00001 Pral-Chr1219 40220 44431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1219g00001 319 577 MAP Kinase Kinase Kinase AT2G17700 33.333 1.14e-48 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Pral1219g00001 PK_Tyr_Ser-Thr 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1219g00001 - - qsa:O6P43_020389 983.786