Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1213g00006 ATGGTTCACTTTCAGAGTGATCCTATCCCCGGAAATAACTGTTACGGTAACGGTAGTTCTCATCATTTTCCCGGTTCCGATGAAGGGCTAATAAGAGAAAGAGAGCTAAGTGGCAAGGGCTTTCATTTGAACAAATCAAGTGGTAATAATCATGGGGGGCCTTTTAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTTAGGACAAGTGAAGACTCGTGGTCCATGGAGATGAGTGCTGGCGGTCTTGTGAGAGCTCTTTTAGGTGTCAAGGAGATTGAGGCAATCTGGATAGGTTGGGCTGGTGTCAATGTGCCGGATGAGATTGGACAGAAGACACTTACTAAGGCTCTGGCTGAAAAGAGGTGCATTCCAGTAATTCTTGATGAAGAGATTGTCCATCAGTATTATAATGGTTACTGCAATAACATCTTGTGGCCCCTTTTTCACTACCTGGGACTTCCACAAGAAGATCGCCTTGCCACCACAAGGAATTTCCAATCTCAGTTTGAAGCATATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAAAGAACACTATCAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATTCTTAAAGGATTATGACAGGAACATGAAAGTTGGCTGGTTTCTCCACACGCCATTTCCGTCTTCAGAAATTCATAGGATGCTGCCATCTCGATCAGAGCTCCTGCATTCTGTTATTGCGGCTGATTTAGTTGCTTTTCACACCTATGATTATGCACGGCACTTTGTTAGCGCTTGCACTCGTATTCTAGGGCTTGAGGGTACCCCTAAAGGGGTTGAAGATCAAGGGAGGTTGACTCGAGTTACTGCATATCCGATTGGGATAGACTCAGATCGGTTCATATGTGCACTTGAGCTTCCTCGAGTTAAGGCTATCATCAGAGACTTCGAACAAAGATTTGAAGGAAGAAAGGTAATGTTAGGTGTTGATCGTCTTGATATGATTAAGGGAATTCCTCAGAAAATCCTAGCATTTGAAAAATTTCTTGAAGAGAATGCCTATTGGCATGATAAAGTAGTTTTAGTTCAAATTGCTGTGCCAACAAGAACAGATGTTCTTGAATATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGGAGATTTGGATCACTGACTGCTGTTCCAGTACTTCACCTGGATCGCTCTCTTGATTTTCATGAACTATGTGCTTTGTATGCTGTAACTGATGTAGCCCTTGTGACATCTTTGAGGGATGGGATGAATCTTGTCAGCTACGAATATGTGGCTTGCCAGGAGAGAAAGAAGGGGGTACTCGTTCTTAGTGAATTTGCTGGTGCAGCA 1386 0.4322 MVHFQSDPIPGNNCYGNGSSHHFPGSDEGLIRERELSGKGFHLNKSSGNNHGGPFRQRLLVVANRLPVSAVRTSEDSWSMEMSAGGLVRALLGVKEIEAIWIGWAGVNVPDEIGQKTLTKALAEKRCIPVILDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRNFQSQFEAYKKANQMFADVVKEHYQEGDVVWCHDYHLMFLPKFLKDYDRNMKVGWFLHTPFPSSEIHRMLPSRSELLHSVIAADLVAFHTYDYARHFVSACTRILGLEGTPKGVEDQGRLTRVTAYPIGIDSDRFICALELPRVKAIIRDFEQRFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWHDKVVLVQIAVPTRTDVLEYQKLTSQVHEIVGRINGRFGSLTAVPVLHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEYVACQERKKGVLVLSEFAGAA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1213g00006 462 Pfam Glycosyltransferase family 20 58 462 IPR001830 GO:0003824|GO:0005992
Pral1213g00006 462 MobiDBLite consensus disorder prediction 1 20 - -
Pral1213g00006 462 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 50 304 - -
Pral1213g00006 462 CDD GT20_TPS 58 462 IPR001830 GO:0003824|GO:0005992
Pral1213g00006 462 Gene3D Glycogen Phosphorylase B; 50 304 - -
Pral1213g00006 462 Gene3D Glycogen Phosphorylase B; 305 462 - -
Pral1213g00006 462 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 462 IPR001830 GO:0003824|GO:0005992
Pral1213g00006 462 FunFam Alpha,alpha-trehalose-phosphate synthase 306 462 - -
Pral1213g00006 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1213g00006 Pral-Chr1213 33399 40637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1213g00006 56 462 Trehalose Biosynthesis Gene Families AT1G78580 87.469 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1213g00006 K16055 - qsa:O6P43_001098 749.199