Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1213g00005 ATGGCTCGTTCTGTCTGCGAAGCTATCTGCGCAATCTCTCCTTCAACATTTCAATATCTGATTTGTGCTCAGACCCGATGGTTTTTTGTGAGGTACGCTTCTTCAACTTCGTCCAATGGGCATTCTTTCACCGTTTCGTATCTCATTGACACCTGTGGCTTCTCACCTACACAAGCTGATTCAACTTCTAAGCACGTCAGCTTAGAAACGCGGGATAAGCCTGATTTGGTTATCAATTTCCTTAAAAGTCATGGATTCTCTCGGCCCCAGATTATTCGTTTCATTACAGATGTCCCATCGTTTCTTCGATATGATCCTGAGAAAACCTTTCTGCCCAAGATTGAATTTTTCAAATCCAGAGGCGTTTTGAGCTCAAACATCCCTAGGATCATATGTAGTTGTCCTAGAATCATGGCAAGAAGCTTAAGGAAGCAGCTCATTCCTTCCTTTGACTTACTTCGAGATGTGTTTCGATCTGACGAGAAGCTCATTAAAACTCTTCAAAAGTACTCGGGCATTCTTATTGACAGCAACACACTTGCCCGGCCTAATATGGAGCTATTGCTAGAAGCAGGAGTTCCTCAATCAAATGTTATCAAATGTGTGCAGGATTTTCCTAGGATTTTTACTAGAAGACCTAACGAATTCAAGGACATTGTGGAAGAAGTTAAGGAAATTGGGTTTGATCATTTGAAGTATAATTTTCTTGTTGCTGTTTTTGTATACTTAGCGTTAGGAAAATCCTTATTCGCCAAAAAGGCTGATGTTTATAAGAAGTGGGGTTGGTCCGACAATGACATTCTCGTGGCATTTAGAAAGTACCCCTTGTGTATGATCACGTCTGAGAATAAGATTGATGCAGTAATGGAGTTTCTTGTCCATAAAATGGGCTGTGAGTCATCAACTATTAGCGAATATCCTTCAGTTTTTGGATTAAGTGTGAAAAGGCGATTGATACCAAGAGGTGCTGTCATTCAAGCTCTGCTGTCAAAGGGTCTGATGGAAAGGGAAACATTGTTTGCAACATTTATATACACTGAAAACTACTTTTTGGGGAAGTTTGTCCATTGTCATGTACAGGAAGCTACTGAATTGTTAGAGTTGTATCAGGCCAAACTGGATCTTGCGGAGTGA 1134 0.4065 MARSVCEAICAISPSTFQYLICAQTRWFFVRYASSTSSNGHSFTVSYLIDTCGFSPTQADSTSKHVSLETRDKPDLVINFLKSHGFSRPQIIRFITDVPSFLRYDPEKTFLPKIEFFKSRGVLSSNIPRIICSCPRIMARSLRKQLIPSFDLLRDVFRSDEKLIKTLQKYSGILIDSNTLARPNMELLLEAGVPQSNVIKCVQDFPRIFTRRPNEFKDIVEEVKEIGFDHLKYNFLVAVFVYLALGKSLFAKKADVYKKWGWSDNDILVAFRKYPLCMITSENKIDAVMEFLVHKMGCESSTISEYPSVFGLSVKRRLIPRGAVIQALLSKGLMERETLFATFIYTENYFLGKFVHCHVQEATELLELYQAKLDLAE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1213g00005 377 PANTHER CGI-12 PROTEIN-RELATED 39 358 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 SMART mt_12 164 194 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 SMART mt_12 199 229 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 SMART mt_12 128 160 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 Pfam mTERF 78 230 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 Pfam mTERF 247 350 IPR003690 GO:0003690|GO:0006355
Pral1213g00005 377 FunFam Mitochondrial transcription termination factor-like 142 362 - -
Pral1213g00005 377 Coils Coil 359 377 - -
Pral1213g00005 377 Gene3D Transcription termination factor 3, mitochondrial 141 367 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1213g00005 Pral-Chr1213 28940 30073 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral1213g00005 mTERF 8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1213g00005 K15031 - qsa:O6P43_003532 343.584