Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1213g00002 ATGAAGATTCAGTGCAACGTGTGTGAGGCGGCGGAGGCGGAGGTTCTGTGCTGCGCGGACGAGGCGGCGCTATGTCGGCAATGCGACGAGAAGGTTCATGCAGCTAATAAGCTGGCTACTAAGCATCAGAGGGTTCCTCTGTCTACCTCTTCCTCTCACATGCCCAAATGTGATATTTGTCAGGAAACAGCTGGCTATTTCTTCTGTCTGGAGGACCGAGCCTTACTATGCAGAAAATGTGATGTGGCAATACACACAGCAAATTCCTATGTCTCTGCTCATCGGAGGTTTCTGCTTACTGGTGTAAGAGTGGGTCTTGAAGCTACTGAGCCTGTTGCTCCATCGTCCTCCGTGAAGTCAGATTCTGGGGGAAAAGTGTCAGATACGGTATCTACTTCTATCTCCAAGAAGGTTTCTTCAACGCCTCAGCCATCTGAATACAATGAATTGTTACCTACTCAAGTTGGGGGAATTGAAGAGTTTCAACCAACCAAAGTGTCTTATGGTGGTGGTTCTACTAACTGGCCGCCACTTGATGAATTTTTCAGTTTCAATGAATTCAGTCAGAATTTCAATTTCATGGATAATGCCAATGGTCCATCCAAGGCTGAAAGCAGCAAGTTTGGGGATTCGGATTCTTCTGTATTAAGATCTAGTGAAGAGGAAATGGATTATGATGATCACTTGGGGTTTGTTCCGGATTCGTCTTGGACGGTTCCTCAGATCCCTTCCCCTCCTACGGCTTCAGGCTTATATTGGCCAAAAGATCCTCGATATTCATCGACTAATAATGCTATGTTTGTTCCTGACATATGTTCTCCTCACATCCAACAGCCTCTTTATGCTCAGAGAAATAGTACGTTATCAAAGCGGCGAAGGCGACAGTAA 888 0.4595 MKIQCNVCEAAEAEVLCCADEAALCRQCDEKVHAANKLATKHQRVPLSTSSSHMPKCDICQETAGYFFCLEDRALLCRKCDVAIHTANSYVSAHRRFLLTGVRVGLEATEPVAPSSSVKSDSGGKVSDTVSTSISKKVSSTPQPSEYNELLPTQVGGIEEFQPTKVSYGGGSTNWPPLDEFFSFNEFSQNFNFMDNANGPSKAESSKFGDSDSSVLRSSEEEMDYDDHLGFVPDSSWTVPQIPSPPTASGLYWPKDPRYSSTNNAMFVPDICSPHIQQPLYAQRNSTLSKRRRRQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1213g00002 295 MobiDBLite consensus disorder prediction 111 148 - -
Pral1213g00002 295 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pral1213g00002 295 CDD Bbox1_BBX-like 5 47 - -
Pral1213g00002 295 Pfam B-box zinc finger 54 94 IPR000315 GO:0008270
Pral1213g00002 295 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pral1213g00002 295 Gene3D Classic Zinc Finger 1 93 - -
Pral1213g00002 295 FunFam B-box zinc finger protein 22 1 93 - -
Pral1213g00002 295 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 274 - -
Pral1213g00002 295 MobiDBLite consensus disorder prediction 198 218 - -
Pral1213g00002 295 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pral1213g00002 295 SMART bboxneu5 52 99 IPR000315 GO:0008270
Pral1213g00002 295 MobiDBLite consensus disorder prediction 198 213 - -
Pral1213g00002 295 MobiDBLite consensus disorder prediction 113 148 - -
Pral1213g00002 295 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1213g00002 Pral-Chr1213 10794 14929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1213g00002 1 294 C2C2-CO-like Transcription Factor Family AT1G78600 45.482 1.57e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1213g00002 zf-B_box 2.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1213g00002 - - gmx:100808889 395.586