Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1213g00001 ATGTCATCTTCTTCCTACGAACTTGTCCTTACCAGTTCTCCAGATGGCCCCATCATCGCCTACGATGCCTCCACTGGGGTTGAAGTCACTCGCTTTCCAGGCACACGGTCACCCCGCCGGGGCCTCACTGTGGCCGGAAATAGCTTCATTGCCGCGTCTCATGTGTCACCCGACACGGCCGCTGTGTCCATTCACCTCTACAACTGGCACACTTCAAGTGTGCTTCACAGATTCTCCGTGCCTGAGTTTGTTGCCCCACTTGCTGCTACTCCCGACGGCGGCTATATCTTCGCCGGAGGCCAGTCCGGAACCATCCATTGCTTCTCTGTTCCTTCTGGGAATATGGTCAAGTCTTTTCCTGCTCACACAAAACCCATCTCTTGTCTCCAACTCAGTATTGATGGGTCATTGGTAATTTCAGGCAGTGATGCTGGAAGCATTATGGTGATCCCAACTTTTCAAATCGTAGAATCATCAGACTCAAACTCAAGCTCAAAAGACTTGATTCTGCAGCATTGGAAGAAGGCACATTCAGATTCAGTCACAGCTTTGAGCACAGGAATAGGGCTATGCAACTCCATGCTTGTCTCGTCCTCGCTAGATTCAACCTGCAAGTTCTGGAATCTTCTAGAGGGAACCCTCCTTCGCACAGTGACCTTCCCTTGTGCCATAAATGGTCTGGCCATGGCCATAGACTTTCATCATCAGACTCACACTTGTTCGCTGCAGGATCAGACGGGTCGGTTTACAAAGCATCAATGA 762 0.5052 MSSSSYELVLTSSPDGPIIAYDASTGVEVTRFPGTRSPRRGLTVAGNSFIAASHVSPDTAAVSIHLYNWHTSSVLHRFSVPEFVAPLAATPDGGYIFAGGQSGTIHCFSVPSGNMVKSFPAHTKPISCLQLSIDGSLVISGSDAGSIMVIPTFQIVESSDSNSSSKDLILQHWKKAHSDSVTALSTGIGLCNSMLVSSSLDSTCKFWNLLEGTLLRTVTFPCAINGLAMAIDFHHQTHTCSLQDQTGRFTKHQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1213g00001 253 SMART WD40_4 71 109 IPR001680 GO:0005515
Pral1213g00001 253 SMART WD40_4 112 151 IPR001680 GO:0005515
Pral1213g00001 253 SMART WD40_4 166 208 IPR001680 GO:0005515
Pral1213g00001 253 Gene3D - 154 249 IPR015943 GO:0005515
Pral1213g00001 253 ProSiteProfiles Trp-Asp (WD) repeats profile. 174 217 IPR001680 GO:0005515
Pral1213g00001 253 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 7 229 IPR011047 -
Pral1213g00001 253 ProSitePatterns Trp-Asp (WD) repeats signature. 195 209 IPR019775 -
Pral1213g00001 253 Gene3D - 1 153 IPR015943 GO:0005515
Pral1213g00001 253 PANTHER WD-REPEAT PROTEIN 18 7 235 IPR045227 -
Pral1213g00001 253 Pfam WD domain, G-beta repeat 114 149 IPR001680 GO:0005515
Pral1213g00001 253 Pfam WD domain, G-beta repeat 175 208 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1213g00001 Pral-Chr1213 7117 7956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1213g00001 96 219 U-box Gene Family AT1G04510 30.645 1.36e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1213g00001 K14829 - qsa:O6P43_029232 277.715