Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1200g00005 ATGGTTTTTCGATTGGTGAATTCAATGTCAGAAGCTCAAGCTTTGGTTAATTTTAAAGCCTCGTTCTCCGATCCTCAAGCTCTGAAAGATTGGGTGGTTAACTCTGTTCCTTGCAAAGAAGGGGAAGAATGGGACGGGGTCATCTGCAACCATGGGGTCATATCTGGCATTCGATTAGAAGGAATGCGGTTGTCCGGGAAGATCGATGTAAATCCGTTGCTAGAACTCAAGGGTCTTCGAACTTTCAGCATTATCAACAACTATTTTTCAGGTGCAATTCCGGAAATCAATAGAATAGGTTTCTTGAGGGCTCTGTACTTGTCGGGAAATCAATTCTCCGGCGAGATTCCGTCGGATTTCTTCCAGAAAATGAGGTCTCTGAAGAAACTATGGCTTAACGACAACAACTTTACGGGTCAGATTCCGTCGCAGATTCCTCAGCTCCTCGAGCTACGCCTTGAGAACAATCAGTTTAGCGGTAACCTCCCGAATCTTAGCACAACATTGCTGATGGAATTCAATGTGTCCAACAACAAATTGGAAGGCGAAATCCCGTCGAGCTTATCAAAATTTAGTGCGAGCTCATTTTCCGATAATTCTGGCCTCTGTGGTGAGAAATTAAACAAACCGTGTAAAAATTCAGTTGAAGCGCCAAAACCCATGGAAAATACGGAACAAGAACAAAACAAAGAAAGCGCTGCGTCTGATTCAAATTCTAGTAGTAATAGTAACACAGTGAAGATTGCCGCAATTGTTGTTGCATCTATTTTAGTGCTTCTGGCACTTCTCGCTCTACTCTATGTTCGATCAAGGCGAAAGAAGAACGAGAAGGGAATACTGGGTTCAGTCCGATCAGAGAGCAACAACGAAGTATCATCAGCATCGGTGGAAGTTCAGGTTGCTGCACCAGAGAAGAAAGAAGAGACAAGTATATCCAGGAAATCAAGTCGTAATGGTTCCAGCAGAAGGGGGAAGGGTGGCGGCGGCGGCAATGGCGGCGTCGGAGACCTTGTTATGGTGAATAGTGAAAGAGGCGTGTTTGGGATGCTGGATTTGATGAAGGCAGCAGCAGAAGTTTTGGGGACTGGAGGGTTTGGATCATCCTATAAAGCGGTGATGGCTGATGGGGTTGCAGTGGTGGTAAAGAGGATGAGGGAGATGAATGTGTTGACGAAAGACGGGTTTGATGCAGAGATGAGGAAGCTTGGGAGTTTGAGACACAAGAATATCTTAACCCCTCTGGCTTATCATTATAGGAAGGACGAGAAGTTAGTGGTGTCTGAGTATGTTCCTAAAGGGAGTCTGCAATATTTGCTGCATGGTGATCGAGGACCATCCCATGCTGAACTGGACTGGCCTACTGGTTTAAAAATTGTGCGAGGGATTGTTGAAGGGATGCTTTATCTTCAAACGCAACTTGCTTCATCTGTTTTATCTCATGGAAATCTCAAGTCTAGCAATGTTCTCCTTGGTCCTGATTTTGAGCCAATGCTAGTTGATTTTGGGTCATGCTCTTTGATCAATCCTGCTAATCTAAGCCAAGCCCTATTTGCTTACAAGACTCCTGAAGCCTTACAGAACGGCCAAGTTTCTCCCAAATCTGATGTTTATTGTCTGGGAGTTGTCATTCTTGAGATCCTCTCTGGGAAATTCCCTTCCCAATATCTCAACAACGGCAATGGTGGAATTGATGTAGTTCTGTGGGCTAACTCAGCAATATCTGAAGGAAGGATATTAGAGATGCTTGATCCTCAACTTGCAAGCTCTAAAAGTTATACAGGTCAGATGGAGAGACTCCTCTATGTTGGTGTTGCTTGTACTGCAAGTAACCCTGAGCAACGACCCGACATGGTTGAAGCACTGAGAAGGATAGAGGAAATACAAAATAAAGGTGCCCAGGAATCCGGCTCAAAAGGTCAAGACGAGTGGTCCCAGAGAAGCTTTGGATCAAGCAGCGTTGGAAGCCAATCGGGCCACCGGCACAGTGAGAGTTTTGATTTTGCCATTTCCTAA 2013 0.4496 MVFRLVNSMSEAQALVNFKASFSDPQALKDWVVNSVPCKEGEEWDGVICNHGVISGIRLEGMRLSGKIDVNPLLELKGLRTFSIINNYFSGAIPEINRIGFLRALYLSGNQFSGEIPSDFFQKMRSLKKLWLNDNNFTGQIPSQIPQLLELRLENNQFSGNLPNLSTTLLMEFNVSNNKLEGEIPSSLSKFSASSFSDNSGLCGEKLNKPCKNSVEAPKPMENTEQEQNKESAASDSNSSSNSNTVKIAAIVVASILVLLALLALLYVRSRRKKNEKGILGSVRSESNNEVSSASVEVQVAAPEKKEETSISRKSSRNGSSRRGKGGGGGNGGVGDLVMVNSERGVFGMLDLMKAAAEVLGTGGFGSSYKAVMADGVAVVVKRMREMNVLTKDGFDAEMRKLGSLRHKNILTPLAYHYRKDEKLVVSEYVPKGSLQYLLHGDRGPSHAELDWPTGLKIVRGIVEGMLYLQTQLASSVLSHGNLKSSNVLLGPDFEPMLVDFGSCSLINPANLSQALFAYKTPEALQNGQVSPKSDVYCLGVVILEILSGKFPSQYLNNGNGGIDVVLWANSAISEGRILEMLDPQLASSKSYTGQMERLLYVGVACTASNPEQRPDMVEALRRIEEIQNKGAQESGSKGQDEWSQRSFGSSSVGSQSGHRHSESFDFAIS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1200g00005 670 Gene3D Phosphorylase Kinase; domain 1 353 429 - -
Pral1200g00005 670 MobiDBLite consensus disorder prediction 291 335 - -
Pral1200g00005 670 Pfam Protein kinase domain 358 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1200g00005 670 MobiDBLite consensus disorder prediction 630 663 - -
Pral1200g00005 670 MobiDBLite consensus disorder prediction 219 242 - -
Pral1200g00005 670 MobiDBLite consensus disorder prediction 628 670 - -
Pral1200g00005 670 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 632 IPR046959 -
Pral1200g00005 670 Gene3D Ribonuclease Inhibitor 9 166 IPR032675 -
Pral1200g00005 670 SUPERFAMILY L domain-like 9 191 - -
Pral1200g00005 670 ProSiteProfiles Protein kinase domain profile. 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1200g00005 670 Pfam Leucine rich repeat N-terminal domain 10 50 IPR013210 -
Pral1200g00005 670 MobiDBLite consensus disorder prediction 212 242 - -
Pral1200g00005 670 SUPERFAMILY Protein kinase-like (PK-like) 358 624 IPR011009 -
Pral1200g00005 670 Gene3D Transferase(Phosphotransferase) domain 1 430 650 - -
Pral1200g00005 670 Gene3D Ribonuclease Inhibitor 167 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1200g00005 Pral-Chr1200 29202 31496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1200g00005 6 627 Receptor kinase-like Gene Family AT3G42880 44.427 3.50e-180 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral1200g00005 Pkinase 4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1200g00005 - - qsa:O6P43_018426 721.465