Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1200g00004 ATGTCGACTTTTTCTGATACGGTGATGGATGGCCGGAGGGTCGGCAAGCCGGCCGAGAGGTCCAATTTCTCCCAGACTTGCAATCTCATAAGCCAGTTCCTGAAGGAGAAGCGTAGTTCTGGTGCTATGAGCCTTGGAATGTGCGGGAAAGTTGAACCCAAAGGGAATCCAACTACTACGCTGGACTTGTTAACATCCCTGGAAAAATCTGATGATGCGTCGAAACAAAGTCCTTCAGCTATAGATTTTCTTCCCCAGCTTGCAGAAAACCAGTCTGTTATTAGGTCACAGACCAAGGCAGAGCCTAAAACTCCCCAAATGGCAATATTTTACTCCGGTAAGGTATTGGCATTTGACGATTTTCCGCCAGAGAAGGCGACGGAGATCATGGAGCTAGCCACCAAGTTAAGCTGTGATAATTCTAGGATCAGCAAAAACACCCCAGGTGTTTCTGCAGCTCTTGAAAATATCAACGAGGTTAAGGTGCCTCAAACAAGCACATCCAAAGAAGTTTCTCGTCCAGGCTCTCTCGCTTCTGGTTCAGATATGAGGTATCCGAGGAGAGCTTCGCTTTTAAAATTTCTGGAGAAAAGAAAAGAAAGGGTCGTTGCAAGAGGACCATATCATATGAACCCTCAGCACGAAGGAGGCAGATCTGGAGGCCACCCTGAAGAACAATCTTGCGAACCTTTTGACCTTAACTTATAG 708 0.4661 MSTFSDTVMDGRRVGKPAERSNFSQTCNLISQFLKEKRSSGAMSLGMCGKVEPKGNPTTTLDLLTSLEKSDDASKQSPSAIDFLPQLAENQSVIRSQTKAEPKTPQMAIFYSGKVLAFDDFPPEKATEIMELATKLSCDNSRISKNTPGVSAALENINEVKVPQTSTSKEVSRPGSLASGSDMRYPRRASLLKFLEKRKERVVARGPYHMNPQHEGGRSGGHPEEQSCEPFDLNL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1200g00004 235 ProSiteProfiles Tify domain profile. 100 135 IPR010399 -
Pral1200g00004 235 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 213 IPR040390 -
Pral1200g00004 235 Pfam Jas motif 187 208 IPR018467 -
Pral1200g00004 235 MobiDBLite consensus disorder prediction 163 182 - -
Pral1200g00004 235 SMART tify_2 100 135 IPR010399 -
Pral1200g00004 235 MobiDBLite consensus disorder prediction 203 235 - -
Pral1200g00004 235 Pfam tify domain 101 133 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1200g00004 Pral-Chr1200 12017 14195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1200g00004 5 219 Tify Gene Family AT1G19180 33.740 3.61e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral1200g00004 tify 7.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1200g00004 K13464 - gmx:100778559 256.144