Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1200g00003 ATGTCGACTTTTTCTGATACGGTGATGGATGGCCGGAGGGTCGGCAAGCCGGCCGAGAGGTCCAATTTCTCCCAGACTTGCAATCTCATAAGCCAGTTCCTGAAGGAGAAGCGTAGTTCTGGTGCTATGAGCCTTGGAATGTGCGGGAAAGTTGAACCCAAAGGGAATCCAACTACTACGCTGGACTTGTTAACATCCCTGGAAAAATCTGATGATGCGTCGAAACAAAGTCCTTCAGCTATAGATTTTCTTCCCCAGCTTGCAGAAAACCAGTCTGTTATTAGGTCACAGACCAAGGCAGAGCCTAAAACTCCCCAAATGGCAATATTTTACTCCGGTAAGGTATTGGCATTTGACGATTTTCCGCCAGAGAAGGCGACGGAGATCATGGAGCTAGCCACCAAGTTAAGCTGTGATAATTCTGCAGCTCTTGAAAATATCAACGAGGTTAAGGTGCCTCAAACAAGCACATCCAAAGAAGTTTCTCGTCCAGGCTCTCTCGCTTCTGGTTCAGATATGAGGTATCCGAGGAGAGCTTCGCTTTTAAAATTTCTGGAGAAAAGAAAAGAAAGGGTCGTTGCAAGAGGACCATATCATATGAACCCTCAGCACGAAGGAGGCAGATCTGGAGGCCACCCTGAAGAACAATCTTGCGAACCTTTTGACCTTAACTTATAG 678 0.4661 MSTFSDTVMDGRRVGKPAERSNFSQTCNLISQFLKEKRSSGAMSLGMCGKVEPKGNPTTTLDLLTSLEKSDDASKQSPSAIDFLPQLAENQSVIRSQTKAEPKTPQMAIFYSGKVLAFDDFPPEKATEIMELATKLSCDNSAALENINEVKVPQTSTSKEVSRPGSLASGSDMRYPRRASLLKFLEKRKERVVARGPYHMNPQHEGGRSGGHPEEQSCEPFDLNL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1200g00003 225 MobiDBLite consensus disorder prediction 152 172 - -
Pral1200g00003 225 ProSiteProfiles Tify domain profile. 100 135 IPR010399 -
Pral1200g00003 225 Pfam tify domain 101 133 IPR010399 -
Pral1200g00003 225 Pfam Jas motif 177 198 IPR018467 -
Pral1200g00003 225 SMART tify_2 100 135 IPR010399 -
Pral1200g00003 225 MobiDBLite consensus disorder prediction 193 225 - -
Pral1200g00003 225 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 203 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1200g00003 Pral-Chr1200 12017 14195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1200g00003 5 209 Tify Gene Family AT1G19180 34.016 1.34e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral1200g00003 tify 6.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1200g00003 K13464 - gmx:100778559 246.128