Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1199g00003 ATGCCATTTGGGTTTGTCTCAGCTTGGAACAAGAGACGTAGAACCAAGTCTCAGGATCACACAGACCCTTGGATATATAAACCTGTGGAGTTGTGGCAGATTGAGGATCAAACACGTCAGCCAAAGAGAAGGCATAATGGGTCGTCTGTGTTCACACTCAGGGAGATGGAAGAAGCAACATGTTCATTCAGTGATGATAATCTGCTCGGAAAAGGAGGATTCGGCAAAGTCTACAGAGGCACTTTACGTTCAGGAGAGGTTGTAGCGATTAAGAAAATGGAGCTGCCAGCATTTAAAGAAGCAGAGGGGGAGAGAGAGTTCAGAGTGGAAGTGGATATCTTGAGCAGATTGGACCACCCGAATCTTGTTTCCTTGATAGGTTATTGTGCAGATGGAAAGCACAGATTCCTGGTTTATGAGTATATGCAAAATGGGAACCTGCAAGATCATTTAAATGGCATTGGAGAGAGAAAAATGGATTGGCCTTCAAGACTCAAAGTGGCACTGGGGGCTGCAAGAGGCCTTGCTTATCTCCATTCAAGTTCTGCAGTTGGAATTCCAATTGTTCATAGGGATTTCAAATCCACCAATGTTCTCTTAAATGCTAACTTTGAAGCAAAGATATCAGATTTTGGGTTGGCTAAGTTTATGCCGGAAGGACAAGAAACTCATGTCACAGCTAGAGTACTTGGTACTTTTGGATACTTTGATCCAGAGTATACATCGACAGGGAAACTGACGCTGCAAAGTGATGTTTACGCATTTGGTGTTGTTCTTCTTGAACTTTTAACTGGACGACGAGCTGTAGATCTGAACCTGGGTCCCAACGATCAAAACCTCGTATTACAGATGACATGCGATGACGACATTTATGAAGGTGAGACACATATTGAATGA 897 0.4326 MPFGFVSAWNKRRRTKSQDHTDPWIYKPVELWQIEDQTRQPKRRHNGSSVFTLREMEEATCSFSDDNLLGKGGFGKVYRGTLRSGEVVAIKKMELPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQDHLNGIGERKMDWPSRLKVALGAARGLAYLHSSSAVGIPIVHRDFKSTNVLLNANFEAKISDFGLAKFMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNLGPNDQNLVLQMTCDDDIYEGETHIE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1199g00003 298 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Pral1199g00003 298 Pfam Protein kinase domain 64 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1199g00003 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pral1199g00003 298 CDD STKc_IRAK 69 282 - -
Pral1199g00003 298 Gene3D Transferase(Phosphotransferase) domain 1 142 293 - -
Pral1199g00003 298 ProSiteProfiles Protein kinase domain profile. 63 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1199g00003 298 FunFam Os07g0541700 protein 142 232 - -
Pral1199g00003 298 PANTHER OS01G0750732 PROTEIN 39 282 - -
Pral1199g00003 298 Gene3D Phosphorylase Kinase; domain 1 29 141 - -
Pral1199g00003 298 SUPERFAMILY Protein kinase-like (PK-like) 40 276 IPR011009 -
Pral1199g00003 298 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1199g00003 Pral-Chr1199 25443 27903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1199g00003 46 281 Receptor kinase-like Gene Family AT3G58690 51.037 6.73e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Pral1199g00003 Pkinase 9.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1199g00003 - - pvy:116116308 527.324