Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1199g00002 ATGCCATTTGGGTTTGTCTCAGCTTGGAACAAGAGACGTAGAACCAAGTCTCAGGATCACACAGACCCTTGGATATATAAACCTGTGGAGTTGTGGCAGATTGAGGATCAAACACGTCAGCCAAAGAGAAGGCATAATGGGTCGTCTGTGTTCACACTCAGGGAGATGGAAGAAGCAACATGTTCATTCAGTGATGATAATCTGCTCGGAAAAGGAGGATTCGGCAAAGTCTACAGAGGCACTTTACGTTCAGGAGAGGTTGTAGCGATTAAGAAAATGGAGCTGCCAGCATTTAAAGAAGCAGAGGGGGAGAGAGAGTTCAGAGTGGAAGTGGATATCTTGAGCAGATTGGACCACCCGAATCTTGTTTCCTTGATAGGTTATTGTGCAGATGGAAAGCACAGATTCCTGGTTTATGAGTATATGCAAAATGGGAACCTGCAAGATCATTTAAATGGCATTGGAGAGAGAAAAATGGATTGGCCTTCAAGACTCAAAGTGGCACTGGGGGCTGCAAGAGGCCTTGCTTATCTCCATTCAAGTTCTGCAGTTGGAATTCCAATTGTTCATAGGGATTTCAAATCCACCAATGTTCTCTTAAATGCTAACTTTGAAGCAAAGATATCAGATTTTGGGTTGGCTAAGTTTATGCCGGAAGGACAAGAAACTCATGTCACAGCTAGAGTACTTGGTACTTTTGGATACTTTGATCCAGAGTATACATCGACAGGGAAACTGACGCTGCAAAGTGATGTTTACGCATTTGGTGTTGTTCTTCTTGAACTTTTAACTGGACGACGAGCTGTAGATCTGAACCTGGGTCCCAACGATCAAAACCTCGTATTACAGGTGAGACACATATTGAATGATCGGAGGAAGCTGAGGAAGGTGATAGATCCAGAAATGGCGAGGAACTCATACACAATGGAATCCATAGCCATGTTCGCGAACCTGGCATCAACATGTGTCCGTACAGATAGTTCTGAGAGGCCTTCCATCGTAGATTGTGTTAAACAACTCCACCAGATTATATATACCAATTCAAGAGGTCTTGGAATGGTTTTGCATAGTTTCAGAATGATTTAA 1086 0.4319 MPFGFVSAWNKRRRTKSQDHTDPWIYKPVELWQIEDQTRQPKRRHNGSSVFTLREMEEATCSFSDDNLLGKGGFGKVYRGTLRSGEVVAIKKMELPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQDHLNGIGERKMDWPSRLKVALGAARGLAYLHSSSAVGIPIVHRDFKSTNVLLNANFEAKISDFGLAKFMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNLGPNDQNLVLQVRHILNDRRKLRKVIDPEMARNSYTMESIAMFANLASTCVRTDSSERPSIVDCVKQLHQIIYTNSRGLGMVLHSFRMI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1199g00002 361 Gene3D Phosphorylase Kinase; domain 1 29 141 - -
Pral1199g00002 361 PANTHER OS01G0750732 PROTEIN 39 345 - -
Pral1199g00002 361 CDD STKc_IRAK 69 343 - -
Pral1199g00002 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1199g00002 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pral1199g00002 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1199g00002 361 PIRSF ILK 29 351 - -
Pral1199g00002 361 FunFam receptor-like serine/threonine-protein kinase NCRK 142 352 - -
Pral1199g00002 361 SUPERFAMILY Protein kinase-like (PK-like) 49 346 IPR011009 -
Pral1199g00002 361 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Pral1199g00002 361 Gene3D Transferase(Phosphotransferase) domain 1 142 351 - -
Pral1199g00002 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1199g00002 Pral-Chr1199 25247 27903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1199g00002 46 344 Receptor kinase-like Gene Family AT3G58690 45.724 3.20e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Pral1199g00002 Pkinase 4.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1199g00002 - - gmx:100777910 648.277