Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1198g00024 ATGCCTCGTAAGGTGAATTATGGACTTGACTATGATGATGATTACGATGACTATGAAGAGTATGACTATGATGTTGAAATAGAAGAATATGGAGAAGAACCTGAACCTGATAAAAAGCAAGAGACTAAAGGGCTTTGGAGATGCTCTATTTGCACTTACGACAACGAAGAGGGCATGATTGTATGTGATATTTGTGGTGTTGTGCGTCATCCTTATGTTAACACGGGAGCTTCTGACAATAGCAAAACAGTTAACGCCAAATGCAAAAATTCTGGAGCATCCAAATTGGCCAAGTCTCTTTTTGCATCAATGCCACAACTGATGCCTAAAGAGAGTGTGTTATTTCTTAAGGAGGGTGATGGTTTTCTGACAGAAGATGGCAATAACTACAAGCTTGGGAATGCCCAAGGAGAATTTTATGAATTTCACAAGTCTTTTATTACTCAAGGCCATCACCATCTAAAAATAGCTCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTTCTACTGGATTGCGGTCTTCCAAAATGGGGTTGAAAGGCACGGTTGCTGACACTAGGAGTTCTTACGTTTCATCAAGTATAATGCAGAACAATGAATTGAAAGTACAGTCAAATGGTGAAAGTTCAGCCAGCTCATCATCTTCGGTTCAGAAGGGCAAGGGGGATAGTTTCAAGCTCTCTAATGATGTGGCATTTGATCAAAAAATAAGTCATAAAACTTCAGGCAGCTTACCAGCATCTTCTGCCATGGGTGAAAGTAAAATGAGTAAAATCAAGTCTACCCATGATGGCAAAATTGATATTCAATCTAGTGAAGAATTGTCAGATAGTTTGTCTGCACTGATGAAAGTCAGAGACAGTCATGGTGAAATTTATTCTTCTTCTAGCAAAGATGTCAGACCTCAAAGGAGTTCTGACAACATGGCTGTTGATGTAAGAACTAAAAAATCAGATAATACTATTTCTAAAGGACCACATCCACAAGTGCCTTATAAACCAGAAAAATGGATGCTCCCTCAGCAAGCTGAAGATACCTTGACACAGCTGAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACACTGTCAGGCAGACTACTACATTTGTTGGGACGAATTACACAAAAAGAAATGCACAAATACGAAAAGGAGGCCAAGTTACAGGGTAAGGGATCCTTTGCTTTTGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACGATGACAGTAGCTGTTGCATATTTTGACACCAACAAATATCATGTTGTTGTGCTCGACTCCCCGGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATTGATGCATCAGTTGGTGCATATGAAGCAGGTATGGATAGTGGCAAAGGACAAACAAGGGAGCATGCACAACTTATTAGAAGTTTTGGTGTTGATCAAGTTATTGTGGCAATAAATAAGATGGATGTTGTGGGATACTCTAAAGATCGGTTTGATTTTATTAGACAGCAATTGGGAGTGTTTCTCCGTACATGTGGTTTTAAAAATTCTTCTGTGTCATGGATTCCCTTGAGTGTTGTAGAAAATCAAAATCTGGTGGCATCTCCTTCTGATGTTCGTTTTAAATCTTGGTATAAAGGACCCTATTTGTTAGATGCAATTGATTCACTTCAACCTCCAATTAGAGAATTCTCAAAGCCGCTGCTAATGCCAATATGTGATGTTATCAAGTCCCCTACACTTGGTCAGGTCTCCGCATGTGGTAAATTGGAAGCTGGAGCTCTTCAGATTGGATCAAAGGTCTTAGTCATGCCTTCAGCTGTTTTGGGGACAGTTCGCACATTGGAGCGTGATTCTAATGCTTGCACTATTGCAAGAGCTGGAGATAATGTAGCTGTCGCGTTGAATGGTGTAGACGCAAGTCATGTGATGCCAGGAGCAGTATTATGCCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAGGGTGCAAATCCCATATTGGTAGGATCGCAGATAGAGTTTCATGTACACCACGCCAAGGAGCCTGCGAGAGTTTCAAAAATATTGTCAATACTTGATCCCAAGACTGGGGAGGTGACAAAAAAGTCCCCCCGCTGTCTCATTGCAAAGCAGAGTGCAGTAGTTGAGGTAATTTTGCAAGAGCCAGTATGTGTGGCAGAATCCTCTAGCTGTAAAGCTCTTGGAAGGGTGTCTCTAAGAGCATCAGGAAGAACAATTGCTGTTGGACTTGTGACCCGAATGATCGGAGAGCAAGAGTGA 2343 0.4123 MPRKVNYGLDYDDDYDDYEEYDYDVEIEEYGEEPEPDKKQETKGLWRCSICTYDNEEGMIVCDICGVVRHPYVNTGASDNSKTVNAKCKNSGASKLAKSLFASMPQLMPKESVLFLKEGDGFLTEDGNNYKLGNAQGEFYEFHKSFITQGHHHLKIAPFKFDVPSPDDVVSTGLRSSKMGLKGTVADTRSSYVSSSIMQNNELKVQSNGESSASSSSSVQKGKGDSFKLSNDVAFDQKISHKTSGSLPASSAMGESKMSKIKSTHDGKIDIQSSEELSDSLSALMKVRDSHGEIYSSSSKDVRPQRSSDNMAVDVRTKKSDNTISKGPHPQVPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKEMHKYEKEAKLQGKGSFAFAWALDESSEERERGITMTVAVAYFDTNKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSGKGQTREHAQLIRSFGVDQVIVAINKMDVVGYSKDRFDFIRQQLGVFLRTCGFKNSSVSWIPLSVVENQNLVASPSDVRFKSWYKGPYLLDAIDSLQPPIREFSKPLLMPICDVIKSPTLGQVSACGKLEAGALQIGSKVLVMPSAVLGTVRTLERDSNACTIARAGDNVAVALNGVDASHVMPGAVLCHPDFPVKVASHLELKVLVLEGANPILVGSQIEFHVHHAKEPARVSKILSILDPKTGEVTKKSPRCLIAKQSAVVEVILQEPVCVAESSSCKALGRVSLRASGRTIAVGLVTRMIGEQE 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1198g00024 780 CDD EF1_alpha 353 572 - -
Pral1198g00024 780 Pfam Elongation factor Tu GTP binding domain 352 568 IPR000795 GO:0003924|GO:0005525
Pral1198g00024 780 SUPERFAMILY Translation proteins 571 666 IPR009000 -
Pral1198g00024 780 MobiDBLite consensus disorder prediction 292 335 - -
Pral1198g00024 780 SUPERFAMILY Ran binding protein zinc finger-like 42 69 IPR036443 -
Pral1198g00024 780 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 349 580 IPR000795 GO:0003924|GO:0005525
Pral1198g00024 780 ProSiteProfiles Zinc finger RanBP2 type profile. 42 71 IPR001876 -
Pral1198g00024 780 FunFam Translation elongation factor EF-1 576 666 - -
Pral1198g00024 780 Pfam Elongation factor Tu C-terminal domain 667 775 IPR004160 -
Pral1198g00024 780 FunFam elongation factor 1-alpha isoform X4 670 779 - -
Pral1198g00024 780 MobiDBLite consensus disorder prediction 203 225 - -
Pral1198g00024 780 CDD HBS1_C_III 667 773 - -
Pral1198g00024 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 594 IPR027417 -
Pral1198g00024 780 MobiDBLite consensus disorder prediction 240 258 - -
Pral1198g00024 780 FunFam Elongation factor 1 alpha-like protein 342 573 - -
Pral1198g00024 780 PRINTS GTP-binding elongation factor signature 493 502 IPR000795 GO:0003924|GO:0005525
Pral1198g00024 780 PRINTS GTP-binding elongation factor signature 412 420 IPR000795 GO:0003924|GO:0005525
Pral1198g00024 780 PRINTS GTP-binding elongation factor signature 448 459 IPR000795 GO:0003924|GO:0005525
Pral1198g00024 780 PRINTS GTP-binding elongation factor signature 353 366 IPR000795 GO:0003924|GO:0005525
Pral1198g00024 780 PRINTS GTP-binding elongation factor signature 432 442 IPR000795 GO:0003924|GO:0005525
Pral1198g00024 780 SMART zf_4 44 68 IPR001876 -
Pral1198g00024 780 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 673 775 IPR009001 -
Pral1198g00024 780 Gene3D Translation factors 577 666 - -
Pral1198g00024 780 Gene3D - 340 573 IPR027417 -
Pral1198g00024 780 MobiDBLite consensus disorder prediction 240 271 - -
Pral1198g00024 780 CDD HBS1-like_II 579 663 - -
Pral1198g00024 780 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Pral1198g00024 780 Gene3D Translation factors 670 779 - -
Pral1198g00024 780 PANTHER TRANSLATION FACTOR 348 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1198g00024 Pral-Chr1198 126523 135097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1198g00024 157 776 Eukaryotic Initiation Factors Gene Family AT5G10630 61.997 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1198g00024 K14416 - gmx:100801724 1070.07