Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1192g00006 ATGGCTGAGGCGTCTGCAACTAAAGGAACCCATGAGGTTGTTCTGAACGTCAATGGCAAATCCAATAATAATGAAGATTCCTGCGTCTGCCTCTTGGTCCCTTTCTTGCAGAAGTTGGTGGCGGAATTCGTCGGGACATTCTTTCTGATGTTTGCAGGCGAAGCATCCGAGGTGGTGGACGTGGGCTACGGCAACAAAATAACGCTTACTGGGATTGCCGTAGTTTGGGGTCTCGCCGTTTTAGTTCTCGTCTACGCCGTTAGTCACATCTCCGGCGCCCATTTCAATCCCGCCGTCACCCTCGCTTTTGCTTCTACCGGACGATTCCCCCTCATACAGGTACCGGCTTATATATCAGTTCAGATTCTGGCATCCATTCTTGCGAGCGGGACTCTGAGGCTCATTTTCACAGGAACCCATGACCACTTCGCAGGAACACTATTATCTGGGACGCATCTTCAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACATCATGCTTGTTAAGTATTCTACCAGTGGTGTGGCCACAGATAACAAAACGATGAGTCAGGTGGCTGGTCTGGCGGTAGGGTCAACCATGTTGCTCAATGTGATGTTTGCCGGGCCGGTGACCGGGGCGTCCATGAATCCGGCGAGAAGCTTAGGGCCGGCAATAGTGTGGCGCCAATATAAAGGAATATGGGTGTACATGACAGCGCCGGTGGCCGGAGCAGTGGCAGGAGCATGGGTGTATAACATCATGATATATACAAACAAGCCAATGCGAGAAATCACAAAGAGTGCTTCTTTCGTGAAAGCTTCAAATGTGATTCCTTCAAGTGATTTTGATTCACTAACACATTCATCATTTAAATAA 861 0.489 MAEASATKGTHEVVLNVNGKSNNNEDSCVCLLVPFLQKLVAEFVGTFFLMFAGEASEVVDVGYGNKITLTGIAVVWGLAVLVLVYAVSHISGAHFNPAVTLAFASTGRFPLIQVPAYISVQILASILASGTLRLIFTGTHDHFAGTLLSGTHLQGFVVEFIITFYIMLVKYSTSGVATDNKTMSQVAGLAVGSTMLLNVMFAGPVTGASMNPARSLGPAIVWRQYKGIWVYMTAPVAGAVAGAWVYNIMIYTNKPMREITKSASFVKASNVIPSSDFDSLTHSSFK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1192g00006 286 PANTHER AQUAPORIN NIP2-1 23 265 IPR034294 -
Pral1192g00006 286 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Pral1192g00006 286 Pfam Major intrinsic protein 33 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1192g00006 286 NCBIfam MIP family channel protein 41 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1192g00006 286 Gene3D Glycerol uptake facilitator protein. 5 262 IPR023271 -
Pral1192g00006 286 SUPERFAMILY Aquaporin-like 31 260 IPR023271 -
Pral1192g00006 286 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1192g00006 286 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1192g00006 286 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1192g00006 286 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1192g00006 286 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1192g00006 286 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1192g00006 Pral-Chr1192 40526 42002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1192g00006 27 268 Major Intrinsic Protein MIP AT5G37820 54.959 4.36e-86 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1192g00006 K09874 - gmx:100798526 340.117