Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1188g00003 ATGGGTTGCTTTTGTTTTGCAAAGAAATCAAGCAGAAAATCGCAGGCCAACGACTATAGCCAGAGCGCAAAGCCCAACAATCACACAGATACGGTGAAAGTTGATTTGAATGTGAATGTGACGAAGGAAGCTCATTCTAAGGGTGATCAACTTTCTCAGGATGTGAAGAGATTAAATTTATCGGACAATGGAGACACTAGTGGTAGCACGGCTCAGACTTTTACTTTTGATGAACTTGCAGCGGCAACAGGAAATTTTAGGTCGGATTGCTTTTTGGGAGAAGGAGGGTTTGGCAAGGTTTACAAGGGGCATTTGCAGAGAATAGACCAGGTTGTGGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGAATTCGGGAATTTGTTGTTGAGGTTTTGACACTTGGTCAAGCAGACCACCCTAATCTTGTGAAATTGATTGGGTTTTGTGCTGATGGAGATCAGAGACTATTGGTCTATGAGTACATGCCATTAGGATCTTTGGAGAACCACTTGCATGATCTTCCACCCGGTAGAAAACCACTTGACTGGAACACGAGAATGCAAATAGCAGCCGGAGCTGCAAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCCCCGGTCATATACCGTGATTTGAAATGCTCAAACATCTTATTAGGTGAAGGATATCATCCCAAGTTATCTGATTTTGGTTTGGCCAAAGTAGGCCCAAGCGGCGATAAGACACATGTTTCAACAAGGGTTATGGGCACGTATGGTTACTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACGTTCAAGTCAGACATCTACAGCTTTGGCGTTGTTCTTTTGGAGCTCATCACAGGCAGGAAAGCCATTGATAACGCTAGACCTGCCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTGTTCAAAGACAGGAGAAAATTCTCCCAAATGGTAGACCCATTGCTGGAAGGCCAGTATCCCGTGAGAGGTTTGTACCAAGCTCTGGCTATTGCTGCCATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTGATAACCGACGTGGTTACCGCATTAAACTACCTTGCCTCCCAGAGATATGATCCCCGAACTCATCATCAAGTACACAACTCCAGAAGAAGGGATGACGATCAAACACATCTTGCTCGTAATGGTTCTTCCTCGGACAGATCATCAGATTAA 1206 0.4486 MGCFCFAKKSSRKSQANDYSQSAKPNNHTDTVKVDLNVNVTKEAHSKGDQLSQDVKRLNLSDNGDTSGSTAQTFTFDELAAATGNFRSDCFLGEGGFGKVYKGHLQRIDQVVAIKQLDPNGLQGIREFVVEVLTLGQADHPNLVKLIGFCADGDQRLLVYEYMPLGSLENHLHDLPPGRKPLDWNTRMQIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNARPAKEQNLVAWARPLFKDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVITDVVTALNYLASQRYDPRTHHQVHNSRRRDDDQTHLARNGSSSDRSSD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1188g00003 401 Gene3D Transferase(Phosphotransferase) domain 1 163 388 - -
Pral1188g00003 401 MobiDBLite consensus disorder prediction 370 391 - -
Pral1188g00003 401 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Pral1188g00003 401 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1188g00003 401 PANTHER OS07G0668900 PROTEIN 14 372 - -
Pral1188g00003 401 FunFam probable serine/threonine-protein kinase RLCKVII 59 162 - -
Pral1188g00003 401 MobiDBLite consensus disorder prediction 368 401 - -
Pral1188g00003 401 SUPERFAMILY Protein kinase-like (PK-like) 72 378 IPR011009 -
Pral1188g00003 401 Pfam Protein kinase domain 91 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1188g00003 401 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Pral1188g00003 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Pral1188g00003 401 FunFam Serine/threonine-protein kinase PBS1 163 379 - -
Pral1188g00003 401 CDD STKc_IRAK 92 361 - -
Pral1188g00003 401 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1188g00003 Pral-Chr1188 5103 8559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1188g00003 1 365 Glycoside Hydrolase AT3G07070 56.300 7.73e-148 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral1188g00003 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1188g00003 - - gmx:100804000 633.639