Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1185g00017 ATGTTGTGGTATCGGCAAAATAGCTATAGTCTTGAAGAGGCACAACGCCAGGAGCACATATTGGAAGCTATTGAACCAAATCAGAGTGTGAAAGAGCTCGCTGTTTATGTATACAAAGCAATGGAATCTCTTCCCCATGGAGGTATGCTTTCAACCTACAACGTCTTTCAATCAGTTGGTGTTCCAAGCTCATTGCGTGTGGTGGGGATGGGGGATTTGTCCCAGAAAAAAGAGGACAAGTTGAAGAAGATGCCAATTAATGGGAGCAATGGAGACTGCAACGCACCGTCTGCTTTCAGAAAGTGTTATTTGGAACAATTGTGCAAATGCAGAGAAAGGCAATACAGAGACCATCATGTGAAGAAGTGGCTTGACGAGCTCAAAGATGAAGTCTTTAAGGCTCAAGACTTGCTGGACGACATTGCTACTGAGGCATCACAACAGAAGCTGTATGCTGAATTGCAAAGTACTGCTGTTATCTGCAAGGTACGAGGCTTGTTTACTACTTTTGCTAGTCGAAATCATTTTGACAAAAAGATAGATTCAGGGATAAAAGAATTGCTTAACAACCTAGAGAATCTTATAAAGCAAAAGAAGAGACTGGGGTTAAAGGAAGGGCCATCTGCTCATGATCAACTGGCAGTGATGAACAGGGGAGTATACAAAAGATTGCCTTCGACACATTTGATAGCTGAATCCAATATTTATGGTAGAGATGCTGATAAAGAGAGGATTGTAGAGATTTTACTATCACAGAACATGGGATGTAGGAATCAGTTGCCTATGGATGTAATTGCTGTCACTGGTATGGGTGGGATGGGTAAGACAACTCTTGCACGACTTGTGTACGAAGATGTAAGGATCAAGGATCAATTTCAACATAGAGCTTGGATGTGTGTTTCTGAAGCATTTGATGTTGATCAAGTTACAAAAGCAATTCTTCATTCACTTAGTTGTCCAATTGAACAAGATTTTCACTCAAATCAGGCAACACTAGGAAAGACGTTGATGGGCAAGAAATTCTTTCTTGTTCTTGATGATGTTTGGAATGAGAATTGTGAGATTTTGGAGGTCTTCACAGCTCCTTTGAAAAATGTGGCGCCACAAAGTAAGATTCTTATCACAACCCGTAATGGAACCGTAGCAGAAGCCATGTGTTGTACCTTCAGATATCCTTTGAAGCCATTACAAGATGGAGATGGTTGGGATTTATTTGCAAAACATGCATTTAACAACCAACATCATGCTGTAGATCCAGATCTTATACAAATTGGCAGAGAAATAATCAACAAGGGTGGAGGATCGCCTTTAGCAATAAAAACACTGGGAAGATTGTTGCACAGAAAACTCTCTTTTCAGCATTGGAATAAGATTTTGAAAAGTGAGATTTGGGAATTATCAGAAAATGATAGCAATATTATCTCATCTTTAAGATTGAGCTACCATTATTTACCTTCAAATTTGAAACGTTGTTTTGTATATTGCTCCATCTTTCCCAAGGATTATCATATAGATAAGAATAACCTAATCCAGTTGTGGATGGCAGATGGTTTAATATTTCCTACTCAGAAAAGTATGAGCCTTGAAGAGGCAGGTGATGAAATTTTCAATTATCTAGTGTCTAGATCATTTTTTGAGCCATCAAGAAAAGGTGACAATTACTTCATCATGCATGATCTTGTGAACGATTTAGCAAAATCTATGGCTGGAGAGTTTTCTGTGCAGCTAGAGGTGGATCAGGCACAAGATATGTCAACCAAGACTCGCTACTTTTCTTATATGGGCAACATTAATCAAAATAATCTTGAGACTTTTGAGAAAGTTTTGAAATGCCAGCAACTATGTAGTTTCATCCTATTTTTGGATAGACATTTCTCCTGCAACTATGTCATTGGTGATAATATAATGTCTAGACTTTCTCATCTCAACTACCTACGAGAATTATCTTTGAAGGGATCTCAAAATTTAAGAAACTTGACAGATGGCATTGGCAATTTAAAGCACTTGCATTATTTGGATCTTTCTTGGACTACTGTTAAGAAATTGCCAGATTCAATGTGCTTGTTGATTAATTTACAAACATTGAAATTAAAAGGTTGTGAATTCTTGACTAAGTTGCCATCAAATTTATACAAACTCATCAATTTGCATCATCTTGACTTGAAAGACTGTGGCATACAGAAGATACCAAGATATATGGGAAAGCTAAATCAGCTCCGAACAATGAATAAATTTGTTGTGGCAAAGAAAGGAGGATCAGAGTTAAAAGAATTAAGTAACTTAAACCACTTAACAGGTTCCTTAAGCATCTCAAATATGCAGTTCATGAATGATCCTGCAAATTCGAGAGGCGCCAATTTGAAAGAAAAGAAATTGGATACACTGAAGTTACTATATTGGAGATATATATGCAGTCGTGAAGAGGCACAACACCAGGAGCACGTATTGGAAGCACTTGAGCCAAGTGATGGTGTAAAAGAACTCATTGTTGAAGGATACGGAGGCACCAAGTTTCCAAAGTGGTTTGGTGATTCACATTTTTTACCCAATTTAGTATCTTTATGTTTGTATGATTGTGATAATGTGAGCTTATTACCACCGCTTGGGCAACTACCTTCTCTCCAGAAACTCGTGATTGAAAATTTTGTTAGAATAAATATGATAGGTGAAGAGTTCTATGGGAATGGCTCATTAATTGCTCCATTTCCTTCCCTTTCGTGTTTACATTTTTCTAATATGAGAAAATGGGAAGAATGGGATATATGTCAAGAAGGTGCTTTCCCACTCCTTGAAGAACTTCATATAAAATATTGTCATAGACTGACAAAGTCTCTGCCCCAACACCTTCCTTGTTTAAAAACACTAGATATTTCGAGATGTGAGAATTTGGAGGCTCCACTTCCCAAGTCCTCTTGCATGGAGAAGCTATGTTTAAGTAATTGCAAGAAGATGTTAGTAAAAGACATGCCCACGTGGAGCTCCCAAGACATGCTTCCACCTCTTCATGTCCTATATTTAAATGATTGTCGAGCAATAGATCAATGGCTTCCCTTTCAAGAAGGTATGCTTTCCAGCCTACAACGTCTTACAATCCATGACTGTTCCAAACTCATTGCGTCTCTTAGGGATTTGGGTTTACATGAGTTCTTATCTTTTAAAGAACTTGACATTGGTGGTACCTTTGATATGAAGTCGTTCCCTGAGGAGGGATTGTTGCCACCCAATCTCCAATCTCTTACATTAAAAGGTTGTTACAATTTGGAAAGAATAAACCATAGGGGCCTTCTGCACCTCCAATCTCTCACTTTCTTATCATTTCAAGATTGCCCTCATACGACTTTTGAAGGTATGCCAGAACATGGTTTACCTCCGTCCCTTTCTCACTTAAGCATTGGTTTCAATTGTCCGTTGCTTGAGGAGAGGTGTGAAATGGAGCAAGGACCCGATTGGCCTAAAATTGCTCACATCCCTCATGTTCTCATGTAG 3486 0.385 MLWYRQNSYSLEEAQRQEHILEAIEPNQSVKELAVYVYKAMESLPHGGMLSTYNVFQSVGVPSSLRVVGMGDLSQKKEDKLKKMPINGSNGDCNAPSAFRKCYLEQLCKCRERQYRDHHVKKWLDELKDEVFKAQDLLDDIATEASQQKLYAELQSTAVICKVRGLFTTFASRNHFDKKIDSGIKELLNNLENLIKQKKRLGLKEGPSAHDQLAVMNRGVYKRLPSTHLIAESNIYGRDADKERIVEILLSQNMGCRNQLPMDVIAVTGMGGMGKTTLARLVYEDVRIKDQFQHRAWMCVSEAFDVDQVTKAILHSLSCPIEQDFHSNQATLGKTLMGKKFFLVLDDVWNENCEILEVFTAPLKNVAPQSKILITTRNGTVAEAMCCTFRYPLKPLQDGDGWDLFAKHAFNNQHHAVDPDLIQIGREIINKGGGSPLAIKTLGRLLHRKLSFQHWNKILKSEIWELSENDSNIISSLRLSYHYLPSNLKRCFVYCSIFPKDYHIDKNNLIQLWMADGLIFPTQKSMSLEEAGDEIFNYLVSRSFFEPSRKGDNYFIMHDLVNDLAKSMAGEFSVQLEVDQAQDMSTKTRYFSYMGNINQNNLETFEKVLKCQQLCSFILFLDRHFSCNYVIGDNIMSRLSHLNYLRELSLKGSQNLRNLTDGIGNLKHLHYLDLSWTTVKKLPDSMCLLINLQTLKLKGCEFLTKLPSNLYKLINLHHLDLKDCGIQKIPRYMGKLNQLRTMNKFVVAKKGGSELKELSNLNHLTGSLSISNMQFMNDPANSRGANLKEKKLDTLKLLYWRYICSREEAQHQEHVLEALEPSDGVKELIVEGYGGTKFPKWFGDSHFLPNLVSLCLYDCDNVSLLPPLGQLPSLQKLVIENFVRINMIGEEFYGNGSLIAPFPSLSCLHFSNMRKWEEWDICQEGAFPLLEELHIKYCHRLTKSLPQHLPCLKTLDISRCENLEAPLPKSSCMEKLCLSNCKKMLVKDMPTWSSQDMLPPLHVLYLNDCRAIDQWLPFQEGMLSSLQRLTIHDCSKLIASLRDLGLHEFLSFKELDIGGTFDMKSFPEEGLLPPNLQSLTLKGCYNLERINHRGLLHLQSLTFLSFQDCPHTTFEGMPEHGLPPSLSHLSIGFNCPLLEERCEMEQGPDWPKIAHIPHVLM 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1185g00017 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 495 IPR027417 -
Pral1185g00017 1161 Gene3D Ribonuclease Inhibitor 623 982 IPR032675 -
Pral1185g00017 1161 PRINTS Disease resistance protein signature 335 349 - -
Pral1185g00017 1161 PRINTS Disease resistance protein signature 432 446 - -
Pral1185g00017 1161 PRINTS Disease resistance protein signature 264 279 - -
Pral1185g00017 1161 PRINTS Disease resistance protein signature 947 963 - -
Pral1185g00017 1161 PANTHER DISEASE RESISTANCE PROTEIN RP 122 939 IPR044974 GO:0006952
Pral1185g00017 1161 Pfam NB-ARC domain 258 481 IPR002182 GO:0043531
Pral1185g00017 1161 Coils Coil 124 144 - -
Pral1185g00017 1161 SUPERFAMILY L domain-like 557 970 - -
Pral1185g00017 1161 SUPERFAMILY RNI-like 902 1139 - -
Pral1185g00017 1161 Gene3D - 480 568 IPR036388 -
Pral1185g00017 1161 Coils Coil 184 204 - -
Pral1185g00017 1161 Gene3D Ribonuclease Inhibitor 989 1148 IPR032675 -
Pral1185g00017 1161 Pfam Rx N-terminal domain 110 156 IPR041118 -
Pral1185g00017 1161 Gene3D - 217 390 IPR027417 -
Pral1185g00017 1161 Gene3D - 100 176 - -
Pral1185g00017 1161 Gene3D - 396 479 IPR042197 -
Pral1185g00017 1161 FunFam Probable disease resistance protein At1g63360 481 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1185g00017 Pral-Chr1185 254873 274719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1185g00017 258 743 WRKY Transcription Factor Family AT5G45050 23.872 2.38e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1185g00017 - - pcin:129315551 1152.5