Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1185g00013 ATGAAGATTGCATCCCGTTCTGCGATCCCAAAAAATGTGATGCACCCGGCCCAGTCAGCCACTGCAAGGCTGGTTTCTGTGAAGGAAGAAAACTGGACAAAGATAGAACAAGAAATTGAGAAGTTGGTGGCTGGAGCGTTTCTCTCCTCCTTCCTTCAAGTGACATTTGAGAGATTGGCTTCTCGTGACTTTCTCGACTACTTTCGTGGCAGAAAGCTTGACCATAGCTTACTGACAAAATTACGCATCATCCTTCTTTCTGTGGACAAAATTGTTGAAGATGTAGAGGAAAGGCAATACAGAGACCATCGTGTGAAGCTGTGGCTTGATGAGCTCAAAGATGAAGTCTTTAAGGCTCAAGACTTGCTGGACGACATTGCTATTGAGGCATCACGACAGGAGCTAGATGCTGAATCGCAAAGTACTGCTGTTATCCGCAAGGTACGAGGCTTCTTTACTGCTCTTGGTAATCAAAATCAATTTGACAAAACGATAGAGTCAGGGATCAAAGTGGTGCTAAACAACCTCGAGTATCTTATAAAGCAAAGTGAGATATTGGCATTCAGGGAAGGGCCATCTACTGGTTTTCAATTGGGAGTAAATAGGAAAGAATACAAAAGATTGCGTACCACAAGTTTGATAGATGAATCCAATATGTATGGCAGAGATGCTGATAAACAGGAGATTGTGGATAAGTTACTATCACAGAACATGGGTGGGAATCAGTTGCCTATGGATGTGATTGCCATCACTGGTATGGGTGGGATGGGCAAGACGACCCTCGCACGACTTGTCTATGACCATGTAAAGATGAAGGATCAATTTCAATATCACGTTTGGGTGTGTGTTGCTGAAGAATTTGATGCTCATCAAATTACAAAAGTGATTCTTAAGTCACTTGATCCTGAAATTAAGATATTAGATGATTTTCAATTATGCCGGCGTAAACTAAAAGAGGAGTTGATGGGTAAGAAATTCCTTCTTGTTCTTGATGACGTGTGGAACGAGAACCGTGAAATTTGGGAGGACTTCCAAGCTCTGTTGAGACAAGTAGCACCACAGAGTAAGATTCTTGTCACAACTCGTAATAGAAAGGTGGCAGAAGTCATGTGTTGTACCTTCACACATCCTTTGATGCCATTACAAGAAGGAGATTCTTGGAAATTATTTGCAAAACATGCATTTGGCAACCAACATGATAATGAAGATCAAAATCTTGAAGAGATCGGTAGAAAAATCGTGAATAAGTGTGGAGGATTGCCTTTAGCAATAAAAACACTGGGAAGTTTGTTGCACAGAAAACTCTCTTCTCAGTATTGGGATAAGATTTTGGAAAGTGAGATTTGGCAATTATCAGAAAATGATAGCAACACTATCCCATCTTTAAGATTAAGCTACCACTATTTACCGTCAAATCTAAAACGTTGTTTTGCATATTGCTCCATTTTTCCTAAAGATTATGATATAGACAAGAATGTCTTAATCCAATTGTGGATGGCAGATGGTTTAATATATCCAACTCAAAGAAGTACAAGCCTTGAAGAAACGGGTGATGAAATTTTCAAAGATCTAGAGTCTAGGTCTTTTTTTGAGCCATCAAAAATAGGTGGCGATTATTTCATCATGCATGATCTTCTAAATGATTTAGCAAAATCTATTGCAGGAGAGTTTTTTGTGTCGCTTGATGCTACTCAAGCACAAGATATGTCAACCAAGACTCGCTACCTTTCATATATAAGATACAAAAGCGATAATGTTGACATTTTTGAGAAAGTTTTAAAATGTCACCAATTACGTAGTTTCATCCAATTTGACAGTCTTAGCATTGGCGATGATATAATGTCCAGGCTTTGTCGTCTCAAGTACATACGACAATTATCTTTGAAGGGATCTCAAAATCTGAGAAGCTTGACAGATGGCATTAGCAATTTAAAGCACCTGCATTATTTGGATCTTTCGTTCACTTCAATTAAGAAATTGCCGAATTCAATATGCTTGTTGATTAATTTACAAACGTTGAAATTAACATATTGTGATGACTTGACTGAGCTGCCGTCAAATTTGTACAAACTCATCAACTTGCGTCATCTTGACTTGGAAGGCTGTGGCATACGGAAGATGCCAAGAGGTATGGGAAAGTTAAATCAGCTCCGAACAATGAATCAGTTTGTTGTGGCAAAGAAAGGAGGATCAAATATAAAAGAATTAGGAGCCCTTAACCACTTAACAGGCTCACTAACCATCTCAAATATGGAGTACGTGAGTGATCCTACAGATATGAGGGAGGCCAAGTTGAAAGAAAAGAAATTGGTTGAATTGACGTTGTCGTATCAGGGAGACAGCTATAGTCGTGAAGAGGCACAATGCCAGGAGCACGTATTGGAAGCCCTTGAGCCAAATCAGAGTGTGAAAGAGCTCACCGTTGAGAGATACAGAGGTACCAAATTTCCAAAGTGGCTTCTTCATTTTCTACCTAATTTAGTGTCTTTATATCTAGGGAGTTGTGGCAACTGTGCGGGCTTACCACCACTTGGGCAACTACCTTCTCTCCAGAAACTCGTGATCCGTGAATTTCATGGAATAAAGGTGATAGGTGAAGAGTTCTATGGGAATGGCTCCTTAATTGCTCAACCATTTCCTTCCCTCTTATATTTAATGTTTTGGGATATGAGAGAATGGGAAGAATGGGATGTATGTTATGAAGGTGAAGGTTTCCCATGCCTTGAAGAACTTCGTATATATGATTGTCCTAAACTGACAAAGTCTCTGCCTCAACACCTTCCTTGTTTGAAAAAACTGAACATTTTTGGATGTTGGAATTTGGAGGCGACACTTCCTAAGTCCTCTTCCATAGAAATGCTGTTTTTAAGGGACTGTATGAAGATATCAGTGAAAGACATGCCCACATGGAGCATCTCAGATGTGCTTCCACCTCTCCATGACCTATATTTATGTAATTGTCCAGCAATGGAATCTCTTCCCCAAGGAGGTATGCTTTCCAGCCTACAACGTCTTACAATCCGTGGGTGTTCCAAGGTCATTGCGTGTGGTAGGGATTGGGGTTTGCATGAGTTGTTGTCTTTGAAACAACTTGAAATTAGTGATGACGTCATGGAGTGGTTCCCTGAAGAAGAGAGATTGTTGCCGCCCAATCTCCAATCTCTGTCATTCGATTGTTGTCACAATTTGAGAAGAATAAACCATAGGGGTCTTGTGCACCTCCATTCTCTCACTTCCTTATCGTTTTATAAGTGCCCTCGCATGAGTTTTGAAGGCATGCCAGAAGAAGATGCTTTACCTCCATCCCTCTCTCATTTACTAGTTGATTTTGGATGTCCGTTGCTGAGGGAGAGGTGTGAAAAGGAGAAAGGACCAGATTGGCCTAAAATTGCTCATATCCCTAATGTCTCCATCTACTCTCTAGAAGCAAAGGTGCCAAAAATAAGAGCACAAGGGCAGGCATGCCCGAAGAGTGAAGACTGCATATCGTTGTATGATTCCAAGAAATGTGATGCAGCTGGTCCAGTCAGCCGCTGCAAGGCTGGCTTCTGTATTTGTTGTGAGAGACCTTCTAATTCAATTTGA 3585 0.4064 MKIASRSAIPKNVMHPAQSATARLVSVKEENWTKIEQEIEKLVAGAFLSSFLQVTFERLASRDFLDYFRGRKLDHSLLTKLRIILLSVDKIVEDVEERQYRDHRVKLWLDELKDEVFKAQDLLDDIAIEASRQELDAESQSTAVIRKVRGFFTALGNQNQFDKTIESGIKVVLNNLEYLIKQSEILAFREGPSTGFQLGVNRKEYKRLRTTSLIDESNMYGRDADKQEIVDKLLSQNMGGNQLPMDVIAITGMGGMGKTTLARLVYDHVKMKDQFQYHVWVCVAEEFDAHQITKVILKSLDPEIKILDDFQLCRRKLKEELMGKKFLLVLDDVWNENREIWEDFQALLRQVAPQSKILVTTRNRKVAEVMCCTFTHPLMPLQEGDSWKLFAKHAFGNQHDNEDQNLEEIGRKIVNKCGGLPLAIKTLGSLLHRKLSSQYWDKILESEIWQLSENDSNTIPSLRLSYHYLPSNLKRCFAYCSIFPKDYDIDKNVLIQLWMADGLIYPTQRSTSLEETGDEIFKDLESRSFFEPSKIGGDYFIMHDLLNDLAKSIAGEFFVSLDATQAQDMSTKTRYLSYIRYKSDNVDIFEKVLKCHQLRSFIQFDSLSIGDDIMSRLCRLKYIRQLSLKGSQNLRSLTDGISNLKHLHYLDLSFTSIKKLPNSICLLINLQTLKLTYCDDLTELPSNLYKLINLRHLDLEGCGIRKMPRGMGKLNQLRTMNQFVVAKKGGSNIKELGALNHLTGSLTISNMEYVSDPTDMREAKLKEKKLVELTLSYQGDSYSREEAQCQEHVLEALEPNQSVKELTVERYRGTKFPKWLLHFLPNLVSLYLGSCGNCAGLPPLGQLPSLQKLVIREFHGIKVIGEEFYGNGSLIAQPFPSLLYLMFWDMREWEEWDVCYEGEGFPCLEELRIYDCPKLTKSLPQHLPCLKKLNIFGCWNLEATLPKSSSIEMLFLRDCMKISVKDMPTWSISDVLPPLHDLYLCNCPAMESLPQGGMLSSLQRLTIRGCSKVIACGRDWGLHELLSLKQLEISDDVMEWFPEEERLLPPNLQSLSFDCCHNLRRINHRGLVHLHSLTSLSFYKCPRMSFEGMPEEDALPPSLSHLLVDFGCPLLRERCEKEKGPDWPKIAHIPNVSIYSLEAKVPKIRAQGQACPKSEDCISLYDSKKCDAAGPVSRCKAGFCICCERPSNSI 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1185g00013 1194 Coils Coil 109 129 - -
Pral1185g00013 1194 SUPERFAMILY RNI-like 879 1115 - -
Pral1185g00013 1194 PRINTS Disease resistance protein signature 642 658 - -
Pral1185g00013 1194 PRINTS Disease resistance protein signature 417 431 - -
Pral1185g00013 1194 PRINTS Disease resistance protein signature 320 334 - -
Pral1185g00013 1194 PRINTS Disease resistance protein signature 247 262 - -
Pral1185g00013 1194 SMART LRR_typ_2 691 714 IPR003591 -
Pral1185g00013 1194 SMART LRR_typ_2 644 667 IPR003591 -
Pral1185g00013 1194 SUPERFAMILY L domain-like 542 941 - -
Pral1185g00013 1194 Pfam Rx N-terminal domain 47 139 IPR041118 -
Pral1185g00013 1194 Gene3D Ribonuclease Inhibitor 581 889 IPR032675 -
Pral1185g00013 1194 Gene3D - 380 465 IPR042197 -
Pral1185g00013 1194 Gene3D - 201 375 IPR027417 -
Pral1185g00013 1194 Gene3D Ribonuclease Inhibitor 899 1132 IPR032675 -
Pral1185g00013 1194 Gene3D - 466 553 IPR036388 -
Pral1185g00013 1194 FunFam Probable disease resistance protein At1g63360 466 552 - -
Pral1185g00013 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 480 IPR027417 -
Pral1185g00013 1194 PANTHER DISEASE RESISTANCE PROTEIN RP 87 916 IPR044974 GO:0006952
Pral1185g00013 1194 Pfam NB-ARC domain 227 445 IPR002182 GO:0043531
Pral1185g00013 1194 ProSiteProfiles Leucine-rich repeat profile. 646 667 IPR001611 GO:0005515
Pral1185g00013 1194 Gene3D - 72 161 - -
Pral1185g00013 1194 FunFam Probable disease resistance protein At5g66910 380 465 - -
Pral1185g00013 1194 FunFam Probable disease resistance protein At1g61300 202 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1185g00013 Pral-Chr1185 158662 216156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1185g00013 229 721 WRKY Transcription Factor Family AT5G45050 23.208 2.04e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1185g00013 - - pcin:129315551 1278.46