Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1185g00012 ATGGATGTGATTGCCGTCACTGGTATGGGCGGGATGGGTAAGACAACCCTTGCACGACTTGTTTATGAAGATCCAAGGATGAAGGATCATTTTCAACATAAAGCTTGGGTGTGTGTTTCTGAAGAGTTTGATGTTGATTGTGTCACAAAAGCAATTCTTCAGTCACTTAGTTGTCCAACTGAAAAAGATTTTCACTCAAATCAGTATAAACTGAAAGAGACATTGATGGGCAAGAGATTCTTTCTCGTTCTTGATGATGTCTGGAATGAGAATTGTCAAATCTGGGAGGTTTTCACAGCTCCTTTGAGACAAGTGGCACCACAGAGTAAGATTCTTATCACAACCCGTAATAAAATGGTAGCAGAAGTTATGTGTTGTGCCTTTACATATCCTTTGAAGCCATTACAAGATGGAGATTGTTGGAATTTATTTGTGAAACATGCATTTAACAACCAACCCGATGCTGTTGGTCCAGATCTTGTACGGATTGGTAAAGAAATCATAAAGAAATCTGGAGGATTGCCTTTAGCAATAAAAACACTGGGAAGTTTGTTGCATATAAAACTCTCTTTTCAGCACTGGAATAAGATTTTGAAAAGTGAGATTTGGGAATTATCAGAAAATGACTGCAATATTGTTCCATCCTTAAGATTGAGTTACCATTATCTACCCTCAAATTTGAAGCGTTGTTTTGCATATTGCTCAATCTTTCCCAAAGATTATGACATAGATAAGAATGTCCTAATCCAATTGTGGATGGCAGATGGTTTAGTATATCCAACTCAAAGAAGTACGAGCCTTGAAGAAACGGGTGATGAAATTTTCAAAGATCTAGAGTCTAGGTCTTTTTTTGAGCCATCAAAAAGAGGGGGCGATTATTTCATCATGCATGATCTTCTTAATGATTTGGCAAAATCTGTGGCAGGAGAGTTTTTTGTGTTGCTCGATGCTGCTCAGACACAAGATATGTCAACGAAGACTTGCTACTTTTCATATATAAGATGCAAAAGTGATAATGTTGACGTTTTTGAGAAAGTTTTAAAATGCCACCAATTACGTAGTTTTATCCTATTTGACAGTCTTGACATTGGCGATGATATAATGTCCAAGCTTTGTCGTCTCAATTAA 1128 0.3715 MDVIAVTGMGGMGKTTLARLVYEDPRMKDHFQHKAWVCVSEEFDVDCVTKAILQSLSCPTEKDFHSNQYKLKETLMGKRFFLVLDDVWNENCQIWEVFTAPLRQVAPQSKILITTRNKMVAEVMCCAFTYPLKPLQDGDCWNLFVKHAFNNQPDAVGPDLVRIGKEIIKKSGGLPLAIKTLGSLLHIKLSFQHWNKILKSEIWELSENDCNIVPSLRLSYHYLPSNLKRCFAYCSIFPKDYDIDKNVLIQLWMADGLVYPTQRSTSLEETGDEIFKDLESRSFFEPSKRGGDYFIMHDLLNDLAKSVAGEFFVLLDAAQTQDMSTKTCYFSYIRCKSDNVDVFEKVLKCHQLRSFILFDSLDIGDDIMSKLCRLN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1185g00012 375 PANTHER DISEASE RESISTANCE PROTEIN RP 2 345 IPR044974 GO:0006952
Pral1185g00012 375 PRINTS Disease resistance protein signature 3 18 - -
Pral1185g00012 375 PRINTS Disease resistance protein signature 74 88 - -
Pral1185g00012 375 PRINTS Disease resistance protein signature 171 185 - -
Pral1185g00012 375 Pfam NB-ARC domain 2 200 IPR002182 GO:0043531
Pral1185g00012 375 Gene3D - 220 307 IPR036388 -
Pral1185g00012 375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 234 IPR027417 -
Pral1185g00012 375 Gene3D - 135 219 IPR042197 -
Pral1185g00012 375 FunFam Probable disease resistance protein At1g61300 1 127 - -
Pral1185g00012 375 Gene3D - 1 128 IPR027417 -
Pral1185g00012 375 FunFam Probable disease resistance protein At1g63360 220 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1185g00012 Pral-Chr1185 143896 145135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1185g00012 4 185 WRKY Transcription Factor Family AT5G45050 27.919 4.81e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1185g00012 - - pcin:129315551 462.225