Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1185g00008 ATGGCGGAGTTGGTGGCTGGAGCGTTTCTCTCTTCTTTCCTTCAGGTGGCATTTGAGAGATTGGCTTCTCCTGACTTTGTTGAATACTTTCGTGGCAGAAAGCTCAATGGTAACTTGCTCAAAGAATTGGAAATCACCCTTAATTCTGTGGACAAAATTGTTGAGGATGCAGAGGAAAGGCAATACAGAGACCATCATGTGAAGAAGTGGCTTGACGAGCTCAAAGATGAAGTCTTTAAGGCTCAAGAGTTACTGGACGACATTGCTACACAACAGAAGATGGATGCTGAATCGCAAAGTACTACTGTTATCCGCAAGGTACGAGGCTTCTTTACTACTCTTGCTAGTCAAAATCATTTTGACAAAAAGATAGAGTCAGAGATAAAAGAAGTGCTTAACAACCTAGAGAATCTTATGAAGCAAAAGGAGAGACTGGGGTTAAGAGAAGGGCCATCTGCTGGAGACCAATCGGGAGTGGTGAACAGGAGAGTATACAGAAGATTGCCTTCAACACATTTGATAGATGAATCCAATATATATGGTAGAGATGCTGATAAAGAGAGGATTGTAGAGCTTTTACTGTCACAGAACATGGGAGGTAGGAATCAATTGCCTCTGGATGTGATTGCCGTCACTGGTATGGGCGGGATGGGTAAGACAACCCTTGCGCTACTTGTTTATGAAGATCCAAGGATGAAGGATCATTTTCAACATACAGCTTGGGTGTGTGTTTCTGAAGAATTTGATGTTGATCACCTGACAAAAGCAATTCTCCAGTCACTTAAGTGTCCACCTGAACAAGATTTTCACGTCAATCAGTCTAAACTAGAAGAGACATTGATGGGCAAGAAATTCTTTCTCGTTCTTGATGATGTCTGGAATTGTCAAAGTTGGGAGGTTTTCACAGCTCCTTTGAGACAAGTAGCACCACAGAGCAAGATTCTTATCACAACCCGTGATAAAACGGTAGCAGAAGTTATGTTTTGTGCTTTTACATATCCTTTGAAGCCATTACAAGATGGAGATTGTTGGAATTTATTTGTGAAACATGCATTTAACAACCAACCCGATGTTGTTGATCTAGATCTTGTACGGATTGGTAAAGATATCATAAAGAAATGTGGAGGATTGCCTTTAGCAGTAAAAACACTAGGAAGTTTGTTGCGTATAAAACTCTCTTTTGAACGCTGGAATAAGATTTTGAAAAGTGAGCTTTGGGCATTGCCAGAAGATCATAACAATATTATTCCATCCTTAAGATTGAGTTACCATTATTTACCCTCAAATTTGAAGCGTTGTTTTGCATATTGCTCAATCTTTCCCAAAGATTATGACATCGATAGGAATGTCCTAATCCAATTGTGGATGGCAGATGGTTTAATATATCCAACTCAAACAAGTACGAACCTTGAAGAAATGGGTGATGAAATTTTCAAAGATCTAGAGTCTAGGTCTTTTTTTGAGCCATCGAAAACAGGTGGCGATTATTTCATCATGCATGATCTTCTGAATGATTTAGCAAAATCTGTGGCAGGAGAATTTTTTGTGTTGCTCGATACTGCTCAGGCACAAGATATGTCAACCAAGACTCGCTACTTTTCATATGTAAGATGCAAAAGTGATAATGTTGACATTTTTGAGAGAGTTTTAAAATGCCACCAATTACGTAGTTTCATCCTATTTGGCAATCTTAGCATTGGTGATGATATAATGTCCAGGCTTTGTCGTCTCAAATACATACGACAATTATCTTTGGAGGGATCTCAAAATTTGAGAAGCTTGACAGATGGCATTAGCAATTTAAAGCACCTGCGTTATGTGGATCTTTCCTTCACTTCAGTTGAGAAATTGCCGAATTCAATGTGCTTGTTGATTAATTTACAAACATTGAAATTAAGAGATTGTGGTCGCTTGACTGAGTTGCCATCAAATTTTTACAAACTCATCAACTTGCGTCATCTTGACTTAGAAGGCTGTGGCATACAGAAGATGCCGAGATATATGGGAAAGTTAAAGCAGCTCCAAAGAATGAATCACTTTGTTATGGCAAAGAAAGGAGGATCAAATATAAAAGAATTAGGTGCCTTAAAGAACTTAACAGGCTCACTAACTATCTCAAATATGAGAGGCATAGTTGATCCTACAGATTTGAGAGAGGCCAATTTGAAAGGAAAGAAATTGGATAAACTAACATTGCAGTATTATTGTGAGGATGATTACAGTCGTGAAGAGGGACATCACGAGGAGCACGTATTGGAAGCACTTGAGCCAAATCAGAGTGTGAAAGAGCTCACCATTAGCGGATACAGAGGTACCAAATTTCCAAAGTGGCTTGGCGTTGAACATTTTTTACCTAATTTAGTGTCTTTAGCTCTGTTGAGTTGCCACAACTGTGTGAAGTTACCACCACTTGGGCAACTACCTTCTCTTCAAGAACTCACGATTAGTGGATTGGATAGAATAAAGGTGATAGGTGAAGAGTTCTATGGGAATGGCTCCTTAGTTGCTCGACCATTTCGTTCCCTCTTACGTTTAATCTTTTCTTCTATGAGAGAATGGGAAGAATGGGATATATGTTGTGAACGTCAAAGTTTCCCATGCCTTGAAAAACTTTCTATAAGCCATTGTCCTAGACTGATAAAGTCTCTGCCTCAACACCTTCCTTGTTTAAAAAAACTCGACATTCAGGACTGTGAGAATTTGGAGGCCACACTTCCCAAGTCCTCTTCCATAGAAAGGCTATCTTTAAGTAATTGTAGGAAGATATCAGTGAAAGACATGCCCACATGGAGCATCTCAGATGGATTGGGGTTTGCATGA 2820 0.394 MAELVAGAFLSSFLQVAFERLASPDFVEYFRGRKLNGNLLKELEITLNSVDKIVEDAEERQYRDHHVKKWLDELKDEVFKAQELLDDIATQQKMDAESQSTTVIRKVRGFFTTLASQNHFDKKIESEIKEVLNNLENLMKQKERLGLREGPSAGDQSGVVNRRVYRRLPSTHLIDESNIYGRDADKERIVELLLSQNMGGRNQLPLDVIAVTGMGGMGKTTLALLVYEDPRMKDHFQHTAWVCVSEEFDVDHLTKAILQSLKCPPEQDFHVNQSKLEETLMGKKFFLVLDDVWNCQSWEVFTAPLRQVAPQSKILITTRDKTVAEVMFCAFTYPLKPLQDGDCWNLFVKHAFNNQPDVVDLDLVRIGKDIIKKCGGLPLAVKTLGSLLRIKLSFERWNKILKSELWALPEDHNNIIPSLRLSYHYLPSNLKRCFAYCSIFPKDYDIDRNVLIQLWMADGLIYPTQTSTNLEEMGDEIFKDLESRSFFEPSKTGGDYFIMHDLLNDLAKSVAGEFFVLLDTAQAQDMSTKTRYFSYVRCKSDNVDIFERVLKCHQLRSFILFGNLSIGDDIMSRLCRLKYIRQLSLEGSQNLRSLTDGISNLKHLRYVDLSFTSVEKLPNSMCLLINLQTLKLRDCGRLTELPSNFYKLINLRHLDLEGCGIQKMPRYMGKLKQLQRMNHFVMAKKGGSNIKELGALKNLTGSLTISNMRGIVDPTDLREANLKGKKLDKLTLQYYCEDDYSREEGHHEEHVLEALEPNQSVKELTISGYRGTKFPKWLGVEHFLPNLVSLALLSCHNCVKLPPLGQLPSLQELTISGLDRIKVIGEEFYGNGSLVARPFRSLLRLIFSSMREWEEWDICCERQSFPCLEKLSISHCPRLIKSLPQHLPCLKKLDIQDCENLEATLPKSSSIERLSLSNCRKISVKDMPTWSISDGLGFA 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1185g00008 939 FunFam Probable disease resistance protein At1g61300 165 330 - -
Pral1185g00008 939 Gene3D - 423 510 IPR036388 -
Pral1185g00008 939 SUPERFAMILY L domain-like 499 922 - -
Pral1185g00008 939 Coils Coil 40 60 - -
Pral1185g00008 939 PRINTS Disease resistance protein signature 885 901 - -
Pral1185g00008 939 PRINTS Disease resistance protein signature 374 388 - -
Pral1185g00008 939 PRINTS Disease resistance protein signature 208 223 - -
Pral1185g00008 939 PRINTS Disease resistance protein signature 279 293 - -
Pral1185g00008 939 Pfam NB-ARC domain 186 423 IPR002182 GO:0043531
Pral1185g00008 939 Coils Coil 71 91 - -
Pral1185g00008 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 437 IPR027417 -
Pral1185g00008 939 Gene3D - 28 120 - -
Pral1185g00008 939 Pfam Rx N-terminal domain 9 95 IPR041118 -
Pral1185g00008 939 PANTHER DISEASE RESISTANCE PROTEIN RP 47 900 IPR044974 GO:0006952
Pral1185g00008 939 Gene3D - 160 331 IPR027417 -
Pral1185g00008 939 Gene3D Ribonuclease Inhibitor 538 933 IPR032675 -
Pral1185g00008 939 FunFam Probable disease resistance protein At1g63360 423 509 - -
Pral1185g00008 939 Coils Coil 121 148 - -
Pral1185g00008 939 Gene3D - 338 422 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1185g00008 Pral-Chr1185 66107 69057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1185g00008 202 659 WRKY Transcription Factor Family AT5G45050 22.457 3.34e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1185g00008 - - pcin:129315551 1063.14