Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1185g00006 ATGGCTTCCGAGAAGCTTGGGTGCTGTGGAAAGTTCCTGGAGAACTCAAAACCCTACTTCGCCATGATCTCTCTGCAGTTTGGTTACGCAGGAATGAACATTATCACAAAGGTTTCTCTTAACCAGGGCATGAGCCACTACGTCCTTGTTGTTTATCGCCATGCTTTTGCCACTGCTGTTATCGCCCCTTTCGCCTTCTTCTTTGAAAGGAAAGCTCAACCAAGGATTACTTTCAGACTTTTCATGCAAATCTTCATACTTGCTCTCCTTGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAATTTACATCCCCAACCTTCTCATGTGCGATGAGCAACATGCTTCCTGCAATGACTTTTGTGATGGCAGCATTATGCAGGATGGAAAAGATAAATATGAGAAAGGTGAGATGCCAAGCAAAGATAGTGGGAACGTTAGTGACAGTTGGTGGAGCCATGTTGATGACACTATACAAAGGGCCTATTGTGGATATGGTTTGGACCAAACATCTTCATAATCAGCTTTCTCACAAAACCTCTGCAATCTCCTCTTCTTCTTCTGCTGCAAACTCTACTTCTGATAGAGAATGGTTAATTGGCTCCATCTTCCTCATCATTGCCACTCTTGCTTGGGCCTCCCTCTTTGTTCTTCAAGCCAAAGTTCTGGAGACATACAAGAACCATCAGCTAAGCCTCACATCTCTGGTGTGCTTCATAGGCACTCTTCAGGCCATTGTTGTGACCTTTGTGATGGAACACAAGCCTTCTGTGTGGAGAATTGGTTGGGATATGAACTTGCTTGCTGCTGCTTATGCTGGGATTGTGACATCAAGCATATCATACTATGTTCAAGGTTTGGTGATCAAGAAGAAAGGACCTGTCTTTGCCACTGCCTTTAGCCCTTTGATGATGATTATTGTCGCCATCATGGGTTCTTTCATCCTTTCTGAACAAATCTATCTCGGAGGGGTGATTGGCTCAATGTTGATAGTGATAGGGCTATACTCAGTCCTATGGGGAAAGCACAAAGAGAGTATGGAGGCCAAAGTGATAATGCTAGAGACACATCAAGAAATTGTAATGCCACCAATATTGCCTCTAAAAGCTCCAAATAATAATAATAATAATATTAATATTAATAATACTGCTGATTCAAAATCTGAGAATAATCACTCTTGTGTTGTTCTTAGCATGCCTTTGCCTGAATCTCCCATTAAAAACCAACCATTTGACGAGGCAGCAAAAGCTTGA 1260 0.423 MASEKLGCCGKFLENSKPYFAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFFFERKAQPRITFRLFMQIFILALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAALCRMEKINMRKVRCQAKIVGTLVTVGGAMLMTLYKGPIVDMVWTKHLHNQLSHKTSAISSSSSAANSTSDREWLIGSIFLIIATLAWASLFVLQAKVLETYKNHQLSLTSLVCFIGTLQAIVVTFVMEHKPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILSEQIYLGGVIGSMLIVIGLYSVLWGKHKESMEAKVIMLETHQEIVMPPILPLKAPNNNNNNININNTADSKSENNHSCVVLSMPLPESPIKNQPFDEAAKA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1185g00006 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 346 - -
Pral1185g00006 419 PANTHER WAT1-RELATED PROTEIN 18 352 IPR030184 GO:0016020|GO:0022857
Pral1185g00006 419 Pfam EamA-like transporter family 202 341 IPR000620 GO:0016020
Pral1185g00006 419 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
Pral1185g00006 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1185g00006 Pral-Chr1185 36599 39360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1185g00006 1 410 Nodulin-like Gene Family AT5G07050 65.860 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1185g00006 - - gmx:100799947 583.563