Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1185g00001 ATGCAAGCAGATGAAGATGTTGGGAAGATAGCACTTGCAGTGCCTGTTTTAGTTTCTAAGGCTCTAGAGCTGTTTTTACAAGACCTCTGTGATCGTACATATGAAATAACTCTTCAGAGAGGAGCAAAGACGATGAGTGCGTTGCATTTAAAACATTGTGTACAAAGCTATAACGTCTTTGATTTTCTGAAGGATGTCGTCAGCAGGGTTCCTGACTATGGCCATGGGCATGGGCATGGGCATGGACATAACCATTCTGAGACTGGCGCTGATGATCGGGTCATTCCAAGAAGAAGGAAAGCAGCAAATGATGATCACCATGATAGCGATGACGACTCTAAGAGAAGCAAGATGGTTGAGTTTAGCCAGAGTGGCGGCAGTGGTAGGGGGAGAGGCCGAGGTAGAGGGAGAGGCCGAGGTCGAGGGGCTCGAAATGCTGAACGGGAAAGAGAGGTTCATCAACAAGAGCTTGAAACTGAACCCTGCACTTCTGCGCTGAACAGCAGCAAACATAACCCTGATACAAACGTGGCAATTGATAATGGTTCAGAGACAAAGGAGTTACCGAAAGAGAATAATGCAATTCCTGATGAAGGCACTCAATCTGTCCGTAACATTGATCTGAATGCCAACTTGAATGAAAACGAAGACAAAAATGCTAGCACGGCGGTAACTGATGCCCCTATGCCTGATCCTCCAAAACCTGAGACTAAGCATGAGGAAATCCCTGGCTGGTCTCTTTCGGATATGGACAAGATGGTCATTGACTCTATGCAGCTTGCCAACCTTGGTAGACAGATAGAAGAGGATCAGGAAGATTATGATGAAGAAGGGTGA 837 0.4624 MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSALHLKHCVQSYNVFDFLKDVVSRVPDYGHGHGHGHGHNHSETGADDRVIPRRRKAANDDHHDSDDDSKRSKMVEFSQSGGSGRGRGRGRGRGRGRGARNAEREREVHQQELETEPCTSALNSSKHNPDTNVAIDNGSETKELPKENNAIPDEGTQSVRNIDLNANLNENEDKNASTAVTDAPMPDPPKPETKHEEIPGWSLSDMDKMVIDSMQLANLGRQIEEDQEDYDEEG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1185g00001 278 SUPERFAMILY Histone-fold 1 70 IPR009072 GO:0046982
Pral1185g00001 278 MobiDBLite consensus disorder prediction 100 118 - -
Pral1185g00001 278 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 54 IPR003958 -
Pral1185g00001 278 MobiDBLite consensus disorder prediction 195 222 - -
Pral1185g00001 278 MobiDBLite consensus disorder prediction 232 246 - -
Pral1185g00001 278 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Pral1185g00001 278 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 107 - -
Pral1185g00001 278 MobiDBLite consensus disorder prediction 140 157 - -
Pral1185g00001 278 MobiDBLite consensus disorder prediction 158 182 - -
Pral1185g00001 278 MobiDBLite consensus disorder prediction 100 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1185g00001 Pral-Chr1185 590 3576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1185g00001 1 267 CCAAT-HAP5 Transcription Factor Family AT3G12480 46.403 8.54e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral1185g00001 CBFD_NFYB_HMF 2.9e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1185g00001 K21752 - gmx:100810093 335.109