Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1184g00047 ATGGGCAGCTGTGGAAGGGAAGGGTCAGTGAGGCAGTATATACGATCGAAAGTCCCTCGTCTAAGATGGACTCCTGAACTGCATCGCTGCTTTGTTCATGCCATTGACACCCTCGGAGGTCATCACAAGGCGACGCCTAAGCTTGTTCTTCAGATGATGGATGTCAAAGGTCTCACTATCTCACACGTGAAGAGCCATCTTCAGATGTACAGAAGCATGAGAAGTAATTTGGGCAGACAAGATGGGAGTTCGAGCCACCATAGAAAGCAATCTTTTGAGGAACATGATGATGGGTGTGTTGATGAAGTGAATGATGCAGATGCTGGTAGAGCTATTATTCAACGATGTTCAAAATCCATGAGGAAAGAATCAGACTCCCCCAGGAGCTACAGTGATTTCTCACCTAAAAGAGCGAGAATGGAGACGAGGAGTTGCATATCAGTAGCAGAGAGGCAAAGAACATGTGAAGCAGGAACAGTGGCGAGTCCGTACAGCTTTTATGATTATGTGCAGGTAACGGGTGAGCGCAAGGGAATAAAGGAGGCTTCTTCTTCATCTTCTGCTGCTGCGACAATATCAATATGGCAGAATCAACCCTTCTCTCTTCTGCCACATTTTCCTAACCTCACTTCTTTCCACCAGCAATCTGATTATCCTCAGGGCAGCGGATTAGGTGGCGGAAATGTTGGTTCAGGGGCGAAGAATGAAGATGCAGAAGAAGGGTGCGAGCTTTCACTATCCCTCTCGCTGCCAAACCAATCCTCAAAGAGGAGCAATAATACAATCACTAACAACAGTGAAATGAGTGAGGCCATGTCGTTCATGTCTTGTTCTTCCTGCGGCAAAGATACTATTAACTTGGACTTGTCCATAGCCCTATGTGGCATTTGA 891 0.4646 MGSCGREGSVRQYIRSKVPRLRWTPELHRCFVHAIDTLGGHHKATPKLVLQMMDVKGLTISHVKSHLQMYRSMRSNLGRQDGSSSHHRKQSFEEHDDGCVDEVNDADAGRAIIQRCSKSMRKESDSPRSYSDFSPKRARMETRSCISVAERQRTCEAGTVASPYSFYDYVQVTGERKGIKEASSSSSAAATISIWQNQPFSLLPHFPNLTSFHQQSDYPQGSGLGGGNVGSGAKNEDAEEGCELSLSLSLPNQSSKRSNNTITNNSEMSEAMSFMSCSSCGKDTINLDLSIALCGI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1184g00047 296 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
Pral1184g00047 296 MobiDBLite consensus disorder prediction 81 97 - -
Pral1184g00047 296 MobiDBLite consensus disorder prediction 76 100 - -
Pral1184g00047 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 117 IPR046955 GO:0003700
Pral1184g00047 296 MobiDBLite consensus disorder prediction 116 136 - -
Pral1184g00047 296 FunFam Myb family transcription factor 17 75 - -
Pral1184g00047 296 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Pral1184g00047 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Pral1184g00047 296 Gene3D - 18 75 - -
Pral1184g00047 296 MobiDBLite consensus disorder prediction 214 236 - -
Pral1184g00047 296 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1184g00047 Pral-Chr1184 306099 310025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1184g00047 1 77 G2-like Transcription Factor Family AT1G14600 73.171 5.55e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral1184g00047 Myb_DNA-binding 3.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1184g00047 - - pcin:129323143 422.935