Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1184g00044 ATGTCTCGGCAGCCTACAGCCCCAGCATATCAGAAATCGAAGACCCTCGACAATAAATATCTGCTGGGAGATGAGATTGGGAAAGGAGCATATGGTCGGGTTTACAAGGGTTTGGACTTGGAGAACGGAGACTTTGTTGCAATTAAACAAGTTTCCTTGGAGAATATTGCTCAGGAAGACCTCAACATCATCATGCAAGAGATTGATCTGTTGAAGATGTTGAATCATAAAAACATTGTAAAGTATCTCGGATCTTCAAAGACAAAGACTCACCTGCATATAATCCTTGAATATGTGGAGAATGGCTCACTTGCGAATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTGCACAGGTATTGGAAGGCTTGGTTTATCTACATGAACAGGGGGTAATCCATCGAGATATTAAAGGTGCAAACATATTGACAACTAAAGAGGGTCTCGTTAAACTTGCTGATTTTGGTGTAGCTACAAAATTGACTGAGGCTGATGTCAATACTCATTCTGTTGTTGGAACACCATATTGGATGGCCCCAGAGGTTATAGAGATGTCTGGGGTTTGTGCTGCCTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGCGTACCCCCTTATTTTGATCTACAGCCTATGCCAGCACTCTTTCGTATTGTTCAGGATGAACATCCTCCACTTCCAGATAGCTTGTCTGCTGACATGACTGATTTTTTGTGCCAATGCTTTAAGAAGGATGCTAGGCAAAGGCCAGATGCTAAAACTTTGCTCTCTCATCCTTGGATACAGAACTGTAGACGTGCTCTGCAGTCATCACTTCGTCATGGCAGAACAATAAAAAATATAGTGGAAGATGATTCAGTGGCCGCAGAGGTTCCTGGTGTTGATCATATGAGATCTGGTGAAAGTTCCTCTGTGGGGAGATTGGTTATTGATGATGATTCAGCTAAACAGTTGTCAACTGAGGCTTCTGATAGAAGGAAACCTGATGCCAATAATTCAAATTCTCATTTGCTTGATGAGTCAATCGAGAAGCCAGTTCCATCTGATCAAGTTCTTGCCTCGTCCATTTCTGAGAGGTCATCTCCACCAAGTGGTCCTAACAAAATTTCTTCTAATGAAGAAGAGGGAAGATCCGAGCTCACTGGTGATCACAACATTGCTCATCCAAGAGAGAACGAAGAAATGATGAATGGATATCAGCAATCAGAAGTGGACAGAAAGCTGGGAGGAAAAGGCAGTTCAATTAACAATGGTGATAAATCAACTATTTTTGGACTAAAAAGTCAAGTTATTGTTTCCCTGAAGGCTAGGAAGATGTCACAACTTATGGAGGGAAATGAGCTGAGTAGATTTACTGACCCTCCTGGAGATGCCTCTTTAGATGATCTGTTTCATCCGTTAGATAAGCACCCTGGGGAGCTGGCAGCTGAAGCTTCCACGTCTGCATCCACGTCAAATGTTGGGAAAGCTATTGCATCTATGAATAATCCTGGGAAGAATGAGCTGGCTAGAGAGTTGAGGGATACAATTGCTCGGAAACAGTGGGAAAAGGAGAGTGAAATTGGACAGGCAAACAATGGTGGGAACCTGTTGCAGCTAATGATGGGAGTTCTAAAAGATGATGTGGCTGATATAGATGGTTTGATCTTTGATGAAAAACTTCCTGGAGAAAATCTCTTTCCTCTACAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTAAGACCAGAAGAACCAGAAGAAGTAATTGTTTCTGCATGTCAGAAACTTGTTACTATCTTTCTGCAACGTCCAGAGCAGAAGATTGTTTATATTACTCAGCATGGCTTACTTCCTCTAACAGACTTGCTCGATGTTCCTAAAACTCGTGTTATATGTTCGGTGCTTCAACTTCTAAATCAAATAATCAAGGATAACACTGATTTTCAAGAAAATGCTTGTCTAGTTGGATTGATTCCCGTTATAATGAGCTTTGCCGCACCTGATCGTCCTCGGGAGATTCGTATACAAGCAGCTTATTTTTTGCAGCAGCTTTGTCAATCGAGCTCTTTGACATTGCAAATGTTCATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTTGAGGCTGACTATGCCAAGTATAGGGAAATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTCTTTAAGCTTCAGCGATCTACCCCTAGAAATGATTTCTGCTGCATAGCTGCAAAGAACGGAATACTCCTTAGGCTCATAAACACCCTTTATAGCTTAAATGAGGCAACTCGACTAGCTTCAGCATCTGTTGGGAGTGGACAGAATGAGACACTGTTATCTTCCGTAGATCAGCAAGATCTCCCGTCAGAGAGGTATGGAATAATTGATCATCAATTGGAACCTTCACATGCATCGAGCTTCCATCTTCAAAAATCAGATGCTAGTTACCTTGTGGGTGATATGACTCAATTTAACATTGCGGCTGCGGAAGTTACATTGTCAGAAAAAAGTCCAATTCTAGTTTCTAGGGATTCATCAGTTGATCAATGGAAAACTGATCCTTCTCAGGGAGATCTTGAACTTAGACAGCAACGTATCAATACTACCACTAATCGGACATCAACTGATTGCCCTCAAAAACTAACAGAACGTGCATCAAATGGTTTATCAATGTCAGCTACCACACAAGAAGAACAAGTTAGGCCTCTTCTTGGCCTGCTAGAGAAAGAGCCTCCGTCTCGACGCTTCTCTGGACAGCTCGAGTATGTTCGTCAGTTATCAGGATTAGAAAGACATGAAAGTGTTCTCCCTTTATTACATAGCTCTGATAAGAAACCTAATGGCGAACTAGAGTTTTTGATGGCAGAATTCACAGATGTAGCTCAACGGGGAAGAGAAAATGGGAATCTTGACTCCAGTGCTAGAATGTCTTTCAAAGCTGTTCCAAAGAGATTAGGGTCTTTAGCATCTAATTATGTAGCTGTTCCAACATCTGGGAGTGTATTGCGGACAACTTCAGGTGTATTGAATGCTAGACAAGGTGATGAAACTTCTACTGGGTTACTTTCCCACACAGTGTCATCATCGAATGCAGATGATGCGAGGGAGTACCTGGAAAAAGTTTCAGATCTTCTTTTGGAGTTTTCTCAAGCAGATACAATAGTAAAGTCATACATGTGCAGCCAAAGCTTGCTAGGTCGGCTTTTCCAGATGTTCAATAGAGTGCAGCCTCCTATTCTGTTAAAGGTACTGAAGTGTGTTAATTATCTGTCAACTGATGCTAATTGCTTAGAGAATCTTCAACGTGCAGAAGTAATAAAGTACTTGATACCGAATCTTGAACTCAAGGAAGGGTATCTTGTATCACAAATACATCATGAGGTCCTGAACGCACTGTTCAATTTATGCAAGATAAATAAGAGAAGGCAAGAACAAGCTGCTGAAAATGGGATCATTCCCCATTTGATGCACTTCATCACATCAAATTCTCCCTTGAAACGATATGCCTTGCCTTTATTGTGTGACATGGCTCATGCTTCTCGCAATTCAAGTGAGCAATTAAGAGCACATGGTGGTCTGGATGTGTATTTAGACCTTCTTGAGGATGAGTTTTGGTCTGTCACAGCATTAGATTCTATTGCTGTTTGCTTAGCTCATGACAATGACAATAGGAAAGCTGAACAAGCGCTGCAGAAAAAAGATGCAGTTCAGAAGCTCATTAAGTTTTTCCAGTGCTGTCCTGACCAGTACTTTGTGCACATTCTGGAGCCGTTCTTGAAAATCATCACAAAATCTGCACGTATCAACACCACACTAGCTGTAAATGGTTTGACATGCTTGCTCATTGCAAGGCTTGATCATCCAAAAGCTATCGCTCGTCTAAATTTACTAAAGCTGATCAAGGCTGTCTACGAACACCATCCACAGCCAAAGAAGTTGATTGTGGAGAATGATTTGCCTCAGAAACTTCAGAGCTTAATAGAGGAACGGCGAGACGGACAAAGTTCAGGAGGCCAAGTGTTGGTCAAGCAAATGGCCACTTCATTACTTAAAGCTCTGCATATAAACACCGTATTATAA 4107 0.4159 MSRQPTAPAYQKSKTLDNKYLLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKMLNHKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYFDLQPMPALFRIVQDEHPPLPDSLSADMTDFLCQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHGRTIKNIVEDDSVAAEVPGVDHMRSGESSSVGRLVIDDDSAKQLSTEASDRRKPDANNSNSHLLDESIEKPVPSDQVLASSISERSSPPSGPNKISSNEEEGRSELTGDHNIAHPRENEEMMNGYQQSEVDRKLGGKGSSINNGDKSTIFGLKSQVIVSLKARKMSQLMEGNELSRFTDPPGDASLDDLFHPLDKHPGELAAEASTSASTSNVGKAIASMNNPGKNELARELRDTIARKQWEKESEIGQANNGGNLLQLMMGVLKDDVADIDGLIFDEKLPGENLFPLQAVEFSKLVGSLRPEEPEEVIVSACQKLVTIFLQRPEQKIVYITQHGLLPLTDLLDVPKTRVICSVLQLLNQIIKDNTDFQENACLVGLIPVIMSFAAPDRPREIRIQAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRSTPRNDFCCIAAKNGILLRLINTLYSLNEATRLASASVGSGQNETLLSSVDQQDLPSERYGIIDHQLEPSHASSFHLQKSDASYLVGDMTQFNIAAAEVTLSEKSPILVSRDSSVDQWKTDPSQGDLELRQQRINTTTNRTSTDCPQKLTERASNGLSMSATTQEEQVRPLLGLLEKEPPSRRFSGQLEYVRQLSGLERHESVLPLLHSSDKKPNGELEFLMAEFTDVAQRGRENGNLDSSARMSFKAVPKRLGSLASNYVAVPTSGSVLRTTSGVLNARQGDETSTGLLSHTVSSSNADDAREYLEKVSDLLLEFSQADTIVKSYMCSQSLLGRLFQMFNRVQPPILLKVLKCVNYLSTDANCLENLQRAEVIKYLIPNLELKEGYLVSQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMHFITSNSPLKRYALPLLCDMAHASRNSSEQLRAHGGLDVYLDLLEDEFWSVTALDSIAVCLAHDNDNRKAEQALQKKDAVQKLIKFFQCCPDQYFVHILEPFLKIITKSARINTTLAVNGLTCLLIARLDHPKAIARLNLLKLIKAVYEHHPQPKKLIVENDLPQKLQSLIEERRDGQSSGGQVLVKQMATSLLKALHINTVL 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1184g00044 1368 MobiDBLite consensus disorder prediction 385 404 - -
Pral1184g00044 1368 SMART arm_5 610 650 IPR000225 GO:0005515
Pral1184g00044 1368 SMART arm_5 1148 1187 IPR000225 GO:0005515
Pral1184g00044 1368 FunFam MAP3K epsilon protein kinase 1 17 305 - -
Pral1184g00044 1368 MobiDBLite consensus disorder prediction 361 384 - -
Pral1184g00044 1368 FunFam MAP3K epsilon protein kinase 1 572 780 - -
Pral1184g00044 1368 Gene3D - 1026 1364 IPR011989 -
Pral1184g00044 1368 CDD STKc_Cdc7_like 19 274 - -
Pral1184g00044 1368 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Pral1184g00044 1368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pral1184g00044 1368 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pral1184g00044 1368 SUPERFAMILY ARM repeat 582 1255 IPR016024 -
Pral1184g00044 1368 MobiDBLite consensus disorder prediction 330 346 - -
Pral1184g00044 1368 Pfam Protein kinase domain 23 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1184g00044 1368 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 724 - -
Pral1184g00044 1368 FunFam MAP3K epsilon protein kinase 1-like 1017 1363 - -
Pral1184g00044 1368 Gene3D - 572 787 IPR011989 -
Pral1184g00044 1368 Gene3D Transferase(Phosphotransferase) domain 1 17 304 - -
Pral1184g00044 1368 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1184g00044 1368 MobiDBLite consensus disorder prediction 305 429 - -
Pral1184g00044 1368 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1184g00044 Pral-Chr1184 280805 301367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1184g00044 1 1368 MAP Kinase Kinase Kinase AT3G13530 68.372 0.0 1843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Pral1184g00044 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1184g00044 - - pcin:129311394 2047.32