Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral1184g00025 | ATGTCAGAATCTAATGCTGTGGCCAACGGGCTGGCCGGTGCAGGCGGTGGCATTATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAATACTCGCCAGCAAACCGAGAGAACGCTCAAGGGCAAGAAGCTGGGCCTTCCTCATTCCCCTAACACGCTTCTTCAGATCCTTCAGGTTGTTAAAAGCGAGGGGTGGGGCGGACTATACAGTGGCCTCAAGCCTTCTCTCCTTGGAACCGCTGCTTCTCAGGGCATTTACTACTACTTTTATCAAGTTTTTAAAAATAAGGCTGTAGCCATTGCTGCTGCCCGCAAAGTCAAAGGACATGGAGATGGTACTGTTGGCATGCTTGGGTGGCTTGCCGTGGCTGCTATTGCTGGGTCCTTGAATGTTCTGTTTACCAACCCAATATGGGTTATAGTGACTCGCATGCAGACACATACTCAAGCAGAAAGAAAAATTATGGAGGGAAAGAAGGAAGCTTTGCGCAGAGAAGCATCAGAAAGCAGTTCTGCTGATTCAACATTGCAAGAAAAATTAGCTCAACTGGAATCTATAAAACCCCAACCATATGGTACTGTACATGCGGCAAATGAAATCTTTAGTGAGGCTGGTGTTGTTGGATTTTGGAAGGGTGTCATCCCTTCTTTGATTATGGTGTGCAATCCATCGATCCAGTTCATGATCTATGAGAGCTCGTTGAAGCATTTAAAGGCAAAACGTGTGGCTAAGAATCAGGGGAATAGAAACGTAACTGCTTTTGAGGTCTTTATGCTGGGAGCCTTAGCAAAACTTGGAGCTACTGTCTCAACATATCCACTGTTGGTTGTCAAGTCAAGGCTTCAAGCTAAACAGGAGATCGGTGGAAGTAGCTCGTTAAGATACTCAGGTACTTTCGATGCAATACTTAAAATAATCCGTTATGAGGGATTACCCGGATTTTATAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCTGCTTCTGTTCTATTCATGGTCAAGGAGGAACTTGTTAAGGCTTACCTGGCTTTGGCAGATAAGAGTAAGAAACTTCTCTTAAGCAGCCATTGA | 1080 | 0.4472 | MSESNAVANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKGKKLGLPHSPNTLLQILQVVKSEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGHGDGTVGMLGWLAVAAIAGSLNVLFTNPIWVIVTRMQTHTQAERKIMEGKKEALRREASESSSADSTLQEKLAQLESIKPQPYGTVHAANEIFSEAGVVGFWKGVIPSLIMVCNPSIQFMIYESSLKHLKAKRVAKNQGNRNVTAFEVFMLGALAKLGATVSTYPLLVVKSRLQAKQEIGGSSSLRYSGTFDAILKIIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAYLALADKSKKLLLSSH | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral1184g00025 | 359 | Pfam | Mitochondrial carrier protein | 116 | 239 | IPR018108 | - | |
| Pral1184g00025 | 359 | Pfam | Mitochondrial carrier protein | 4 | 96 | IPR018108 | - | |
| Pral1184g00025 | 359 | Pfam | Mitochondrial carrier protein | 252 | 344 | IPR018108 | - | |
| Pral1184g00025 | 359 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 115 | 237 | IPR018108 | - | |
| Pral1184g00025 | 359 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 252 | 343 | IPR018108 | - | |
| Pral1184g00025 | 359 | Gene3D | Mitochondrial carrier domain | 1 | 105 | IPR023395 | - | |
| Pral1184g00025 | 359 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 4 | 97 | IPR018108 | - | |
| Pral1184g00025 | 359 | SUPERFAMILY | Mitochondrial carrier | 5 | 339 | IPR023395 | - | |
| Pral1184g00025 | 359 | Gene3D | Mitochondrial carrier domain | 106 | 346 | IPR023395 | - | |
| Pral1184g00025 | 359 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 5 | 348 | IPR044712 | GO:0006862|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral1184g00025 | Pral-Chr1184 | 156585 | 162616 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral1184g00025 | 26 | 344 | Chloroplast and Mitochondria Gene Families | AT1G25380 | 27.356 | 6.27e-31 | 119 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral1184g00025 | K13354 | - | gmx:100775304 | 543.502 |