Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1184g00012 ATGTCTCAAACATCTAGGGTCCCACCTGCCATTCAATCTATCAAATCAATTTCGTCTGAGTTCAAGTTGACAGGCAATGCAACCCCTAATATTCTGGGAAAAAGTCCAAATGTTAAACCGGGAAGCACTGATGTAGTAGCATCAGGTAGTCCTGAAAATGGTGCGATAGGAAAGAAGGTTTCCGAGGTACTTCAGGACTGTGCTGGTGACATGGATTTCGTCAATGAGGACTCGCCATATGGTGGAAAAAATACATCACTAGAAAGTAGGCACTCAAGTGGTGATGAAGAAGTTGATCCTTTACCTCTGCCCCTTTCTTCAATCTCAAAATCTTTCTGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAACATGAAGCTCCAGTCATGGTTTCAACTTCCAAATGGAAATTGGGAGTTGGGGAAAATGTTATCAATTTCTGGAACTGAATCTGTTATTTCACTGCCTGATGGGAAGGTTTTAAAAGTGAACAGTGAAAGTTTGGTGCCGGCAAACCCTGATATTCTTGAGGGAGTGGATGATCTAATGCAACTTAGTTATTTAAACGAACCTTCAGTTTTATACAATTTGCAGCATAGATACAATCAAAATATGATTTATACGAAAGCTGGGCCAATTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCCTTTATATGGAAATGATTATATCGAAGCATACAAGCGTAAAACAATTGAAAGCCCTCATGTATATGCCATTACAGAGACAGCTATTCAGGAAATGATACGAGATGAAGTAAATCAATCCATTATCATAAGTGGCGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTGGGAGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGCAATGCGAAGACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATACACTTCAGTGAGACTGGAAAGATATCGGGTGCTAATATTCAGACATTTTTGCTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGAGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCACCTTCTCTCAGGGAGAAGTTGAATCTGCATAGTGCAGAAGACTACAAATATCTCAGGCAGAGTAATTGTTATTTGATATCTGGTGTTAATGACGCAGAGGAATTTAGCATAGTCATGGAAGCTTTGGATGTTGTCCACATCAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTACTATGGCTAGGAAACATATCTTTTACTATAATTGATCATGAAAATCATGTTCAAGCTGTAGAAGACGAGGCTCTGTTGAACGTCGCCAAATTGATACGCTCTGACATTGGAGATCTTAAATTAACTTTATCGACTCGCAACATGAAAGTTGGTAATGATAATATTGTTCAAAAGTTGAAGCTATCGCAGGCCATTGATGCTAGAGATGCTTTGGCGAAGTCAATATATGCTTGTCTGTTTGATTGGCTGGTAGTGCAAATAAACAAATCGCTCGCTGTTGGCAAAAGGTGTACAGGCAGATCAATCAGCATTCTAGATATATATGGGTTTGAATCATTTGATAGGAATAGTTTTGAGCAGTTCTGTATCAATTATGCAAATGAGAGATTGCAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATACATCCAAGATGGCATTGACTGGGCAAAAATTGAATTTGATGATAACCAAGACTGCCTCAATCTTTTTGAACAGAAACCACTGGGATTACTATCTCTGTTAGATGAAGAGTCCACATTCCCTAATGGCACAGATCTGACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGTTTCAGAGGAGAGCGAGACAAGGCTTTTACTGCGTGTCACTATGCTGGGGAGGTCACATACGACACAACTGGATTTCTAGAAAAAAACAGGGACCTATTACACTTGGATTCCATTCAACTTCTATCGTCATGCAGGTGTGATCTTCCTCAGATATTTGCATCCTTTATGCTCACTCAGTCTGAGAAGCCTGTTGTCGGTCCCTTACACAAATCAGGTGGAGCTGATTCCCAAAAGCTGAGTGTTGCGACAAAGTTCAAGGGTCAACTGTTCCAATTGATGCAAAGGTTGGAGAGCACCACCCCACATTTTATTCGCTGTATTAAGCCCAATAACCTCCAATCTCCAGGATTATATGAGCAAGATCTTGTGCTACAGCAACTAAAATGTTGTGGGGTACTAGAAGTGGTTCGAATATCAAGATCAGGCTTCCCTACCAGGATGTCTCACCAAAAGTTTGCCAAAAGATATGGTTTTCTCCTCCTTGAGGATGTTGCATCTCAGGATCCACTTGGTGTTTCAGTCGCAATTCTTCATCAGTTTAATATTTCGCCTGATATGTATCAAGTTGGTTACACAAAATTATTTTTCCGAACAGGCCAGATTGGAGTGCTTGAAGATACCAGAAATCGTACCCTCAATGGCATTTTACGCGTCCAAAGTTGCTTCAGGGGTCACCAAGCTCGATGTTACCTGAAGGAACTTCGCCGAGCAATCATTACTCTTCAGTCTTTTATTAGGGGAAAGAAAATCAGAGACGAATATGCAGCTTCAATTCAGAGACATCGAGCTGCTGTCCTTATACAGAAGCGGATGAAAGCGGCATTTGTAAGAAGCAGAATGAAGAACACTAATGAAGCTGCAATTGTTATACAATCAATCATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGGGATTTAGGATCATTGAAATCTGAAGGCGTGAAGACAAATGAATCGGATGAGGTACTGGTCAAGTCTTCTTTCTTAGCTGAATTACAGCGTCGGGTGCTCAGGGCAGAAGCTTCACTGAGAGAGAAAGAAGAGGAAAATGACATCCTCCACCAACGGCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAGTTGAAGATGAAGTCCATGGAAGAAGTGTGGCAAAAGCAGATGAGATCCCTACAGTCCAGCCTCTCTATAGCAAAGAAGAGCCTTGCGATTGATGATTCAGAAAGGAACTCAGATGCATCCGTCAATGCAAGTGATGAAAGAGATTGTGGCTGGGATATAGGAAATAATCATGAATGCCAAGAAAGCAATGGAACAAGATCAATGAGCGCAGGCTTGAGTGTTATAAGTCGATTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTGGAGGTAAAATCTGGTCAAGTTGACGCAAGTTTGAACCCAGACCAGGAGCTCAGAAGGTTGAAGCAAATGTTCGAAGCTTGGAAAAAGGATTATGGTGCAAGACTACGTGAAACTAAGGTCATCTTACATAAGCTTGGAACTGAGGAAGTTGCAGTTGACAAAGTGAAGAAGAAATGGTGGGGAAGAAGGAACAGTACAAGGATTAATTGA 3531 0.4106 MSQTSRVPPAIQSIKSISSEFKLTGNATPNILGKSPNVKPGSTDVVASGSPENGAIGKKVSEVLQDCAGDMDFVNEDSPYGGKNTSLESRHSSGDEEVDPLPLPLSSISKSFWERRWSDTTPYASNMKLQSWFQLPNGNWELGKMLSISGTESVISLPDGKVLKVNSESLVPANPDILEGVDDLMQLSYLNEPSVLYNLQHRYNQNMIYTKAGPILVAVNPFKKVPLYGNDYIEAYKRKTIESPHVYAITETAIQEMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLHSAEDYKYLRQSNCYLISGVNDAEEFSIVMEALDVVHISKEDQENVFAMLAAVLWLGNISFTIIDHENHVQAVEDEALLNVAKLIRSDIGDLKLTLSTRNMKVGNDNIVQKLKLSQAIDARDALAKSIYACLFDWLVVQINKSLAVGKRCTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKIEFDDNQDCLNLFEQKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFRGERDKAFTACHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCRCDLPQIFASFMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGLYEQDLVLQQLKCCGVLEVVRISRSGFPTRMSHQKFAKRYGFLLLEDVASQDPLGVSVAILHQFNISPDMYQVGYTKLFFRTGQIGVLEDTRNRTLNGILRVQSCFRGHQARCYLKELRRAIITLQSFIRGKKIRDEYAASIQRHRAAVLIQKRMKAAFVRSRMKNTNEAAIVIQSIIRGWLVRRCSGDLGSLKSEGVKTNESDEVLVKSSFLAELQRRVLRAEASLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDCGWDIGNNHECQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVDASLNPDQELRRLKQMFEAWKKDYGARLRETKVILHKLGTEEVAVDKVKKKWWGRRNSTRIN 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1184g00012 1176 ProSiteProfiles IQ motif profile. 855 882 IPR000048 GO:0005515
Pral1184g00012 1176 ProSiteProfiles IQ motif profile. 876 905 IPR000048 GO:0005515
Pral1184g00012 1176 Gene3D Myosin VI head, motor domain, U50 subdomain 418 526 - -
Pral1184g00012 1176 FunFam Myosin heavy chain 361 417 - -
Pral1184g00012 1176 Gene3D - 549 741 - -
Pral1184g00012 1176 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 ProSiteProfiles IQ motif profile. 925 954 IPR000048 GO:0005515
Pral1184g00012 1176 SMART MYSc_2a 173 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 Pfam IQ calmodulin-binding motif 877 896 IPR000048 GO:0005515
Pral1184g00012 1176 Pfam IQ calmodulin-binding motif 857 874 IPR000048 GO:0005515
Pral1184g00012 1176 Pfam IQ calmodulin-binding motif 927 943 IPR000048 GO:0005515
Pral1184g00012 1176 SMART iq_5 875 897 IPR000048 GO:0005515
Pral1184g00012 1176 SMART iq_5 852 874 IPR000048 GO:0005515
Pral1184g00012 1176 SMART iq_5 901 923 IPR000048 GO:0005515
Pral1184g00012 1176 SMART iq_5 924 946 IPR000048 GO:0005515
Pral1184g00012 1176 Gene3D - 856 903 - -
Pral1184g00012 1176 Gene3D - 904 947 - -
Pral1184g00012 1176 MobiDBLite consensus disorder prediction 26 55 - -
Pral1184g00012 1176 Coils Coil 971 1019 - -
Pral1184g00012 1176 ProSiteProfiles Myosin motor domain profile. 179 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 FunFam Unconventional myosin-XIX 549 741 - -
Pral1184g00012 1176 MobiDBLite consensus disorder prediction 71 101 - -
Pral1184g00012 1176 Gene3D Kinesin motor domain 178 784 IPR036961 -
Pral1184g00012 1176 Gene3D - 785 852 - -
Pral1184g00012 1176 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 PRINTS Myosin heavy chain signature 590 618 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 PRINTS Myosin heavy chain signature 537 565 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral1184g00012 1176 PANTHER MYOSIN 172 1171 - -
Pral1184g00012 1176 MobiDBLite consensus disorder prediction 26 49 - -
Pral1184g00012 1176 Gene3D - 361 417 - -
Pral1184g00012 1176 CDD MYSc_Myo8 193 839 IPR036022 -
Pral1184g00012 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 896 IPR027417 -
Pral1184g00012 1176 Pfam Myosin head (motor domain) 181 839 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1184g00012 Pral-Chr1184 72377 92563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1184g00012 6 1174 Myosins gene family AT1G50360 74.295 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1184g00012 - - gmx:100781736 1948.71