Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1184g00001 ATGTCTAACTCTGACGGAGCTACCACCAACGGTAACGGCGCAATCATTGACCCGCAGAGGCAGCAACAGCAGCAGTCGTCCTCCGGAAACGGCGCTCTCGCCGTTAAGAAGCCGCCGTCTAAGGACCGTCACAGCAAGGTCGACGGCCGAGGTCGCCGTATTCGCATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACGCGTGAGTTGGGTCACAAATCCGACGGTCAAACCATCGAGTGGCTCCTACGCCAGGCCGAACCCTCCATCATAGCCGCCACCGGCACCGGCACCACTCCTGCGAGCTTCTCCACCGTTTCGGTCTCTGTACGCGGAGGCGGCGGCGGAGGAGGTTCGAACTCCCTATCGTCGTCTTCTACCACTTCTACTTCTCTTGACCATAAGCCTGCCCTTCTGGGTCCGACACCCTTCATACTCGGAAAGCGCATACGGACCACCGATGATGACGCTGCTAAGGATGATGGCGTCACCGTGGGACCCACTGTTGGGTCAATAGTAGGGCCGACGACACCAGCTGGGTTATGGGCACTTCCGGCCAGGCCTGACTTCGGCCAGGTATGGAGTTTTGCTGCAGCTGCGGCCGCTCCTCCGCCAGAGATGGTGGTTCAGCCCGCGGGTGTGTCGGTGTCGCAGCAGCAGCATGCTTCGTTATTCGTTCATCATCATCAGCAGCAACAAGCCATGGGCGAGGCGTCGGCGGCTCGACTGGGTAATTACCTTCCAGGACATCTGAATTTGCTGGCTTCTTTGTCGGGTGGGCCCGGAAGTTCAGGTCGGAGAGATGATGAGCCTCGATAA 822 0.5949 MSNSDGATTNGNGAIIDPQRQQQQQSSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGGGGGSNSLSSSSTTSTSLDHKPALLGPTPFILGKRIRTTDDDAAKDDGVTVGPTVGSIVGPTTPAGLWALPARPDFGQVWSFAAAAAAPPPEMVVQPAGVSVSQQQHASLFVHHHQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGSSGRRDDEPR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1184g00001 273 ProSiteProfiles TCP domain profile. 40 94 IPR017887 -
Pral1184g00001 273 MobiDBLite consensus disorder prediction 37 52 - -
Pral1184g00001 273 MobiDBLite consensus disorder prediction 1 52 - -
Pral1184g00001 273 Pfam TCP family transcription factor 40 116 IPR017887 -
Pral1184g00001 273 MobiDBLite consensus disorder prediction 1 33 - -
Pral1184g00001 273 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 249 IPR005333 GO:0003700
Pral1184g00001 273 MobiDBLite consensus disorder prediction 95 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1184g00001 Pral-Chr1184 2317 14918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1184g00001 5 273 TCP Transcription Factor Family AT5G23280 62.500 8.13e-99 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral1184g00001 TCP 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1184g00001 K16221 - qsa:O6P43_020036 363.229