Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1172g00030 ATGGGAGAGAAAGATAACCAAGTTGTGCTGTTGGGAACATGGGCATGTGCCTACTGTAGAAGGGTTGAACTGGCCCTCAAACTTAAAGGCATACCCTACAAATATATGGAGGAAGACTTATCGAACAAAAGTGATCTACTGCTGACGAACAATCCTGTGAAAAAAGTTCCTGTGCTGTTACACAATGATAAGGCAATAGCTGACTCGCTTGTGATTCTGGAGTACATCGACGAAACTTGGGGTCACACTTCTAGACTCTTGCCTCATGATCCTTATCAAAGGGCCAAAATCCGCTTTTGGGTCAACTACCATGATCAAAAAATCATTCCAGCTATCTACACCATCCTACGATCAAAAGCGAAAGAAAGAGAGAAAGCAATTGAGAAGGTGAATGAGTTAGTTGCCATTTTTATTGAAGGGATCGAGAAAGATTTTGCTGAGGAATTCCTTTACTCCAAGGGCATTAAGACTTTGGGGCTGCTGGACATTGTGGTGGGAGCAAACTCTACTAACTACAAGGCCATCAAGGAGGCCACAAAAATGGAGATGATTTGTCCCCAAAAGAACTTCGAGTTCCTCTCATGGGAGAATGCCCTGAACGGACATCCTTTGATAAAGGAGTTACAGCCTCCTCTTGACAAGCTGGTGGCCAAGTTGATTGAGAAATTCGGCACTCTCAATTGA 684 0.4357 MGEKDNQVVLLGTWACAYCRRVELALKLKGIPYKYMEEDLSNKSDLLLTNNPVKKVPVLLHNDKAIADSLVILEYIDETWGHTSRLLPHDPYQRAKIRFWVNYHDQKIIPAIYTILRSKAKEREKAIEKVNELVAIFIEGIEKDFAEEFLYSKGIKTLGLLDIVVGANSTNYKAIKEATKMEMICPQKNFEFLSWENALNGHPLIKELQPPLDKLVAKLIEKFGTLN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1172g00030 227 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Pral1172g00030 227 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Pral1172g00030 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 214 IPR045073 -
Pral1172g00030 227 CDD GST_N_Tau 8 80 - -
Pral1172g00030 227 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Pral1172g00030 227 Gene3D - 87 225 - -
Pral1172g00030 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
Pral1172g00030 227 SUPERFAMILY GST C-terminal domain-like 78 220 IPR036282 -
Pral1172g00030 227 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Pral1172g00030 227 FunFam Tau class glutathione S-transferase 1 89 - -
Pral1172g00030 227 Gene3D Glutaredoxin 1 86 - -
Pral1172g00030 227 Pfam Glutathione S-transferase, N-terminal domain 10 79 IPR004045 -
Pral1172g00030 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1172g00030 Pral-Chr1172 840306 841475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1172g00030 1 223 Glutathione S-transferase Gene Family AT1G74590 41.518 6.72e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1172g00030 K00799 - qsa:O6P43_025459 271.552