Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1170g00004 ATGTTTTACTCTAGTCATGCTCGAGGCCGTATTGCCATCGCTTATCTGTTTCTTGCAGTTATTTCTGCAGAAACTAGATTTTGCTTCTGTTCTAAGGTTTATGTAGTTTACATGGGAAGCAAAACGGGCGAAGACCCTGATGATATTCTGAAGCAACACCATCAAATGCTCACTTCTGTTCACAGAGGGAGTGTTGAGGAGGCTCAAGCTTCCCATGTTTATAGCTACAGACATGGCTTCAGAGGCTTCGCAGCCAAGTTGACTGATGAACAAGCTAACCAAATTTCTGATATGCCCGGAGTAGTCTCTGTTTTCCCCAATTCTAAGAGAATTCTTCACACAACATATTCGTGGGATTTTATGGGACTTCCAGACGACGAAAACATGAAGATTTTTGGGCACTCCAACAGAAACCAAGCAAATGTAATAGTTGGCTTCATTGATACAGGAATTTGGCCTGAATCCCCTAGTTTTAAAGATTCAGACATGCCTCCAGTGCCATCCGAATGGAAGGGACATTGTCAAACAGGAGAAGCTTTCAACGCTTCATCTTGCAACAGGAAAGTGATTGGAGCTAGATACTATGCAAGTGGATTTGTAGCAGAGGAAGGCCTAGAGAACAAATTTTCTTACAAATCTCCCAGGGATAGCTCTGGCCATGGCAGCCACACCGCCTCAATAGCTGCAGGGCGCCACATGGAAAACATGAACTACACGGGATTGGGAGCTGGAAAAGCTAGGGGAGGAGCACCAAAGGCTAGGATTGCTGTGTACAAAACTTGCTGGGACTCGGGTTGCTATGACGCAGACTTACTAGCTGCCTTTGATGATGCCATCCGAGATGGGGTTCACATTCTGTCTCTCTCTCTTGGTTCCGAAGCTCCTCAAGGAGACTATTTCAGTGATGCCATATCTGTCGGGTCATTCCATGCTGCTAGTCATGGAGTGCTTGTGGTCGCTTCAGCTGGGAATAATGGAAATCCTGGTTCTGCTGCAAACCTTGCACCATGGATGACCACTGTTGCTGCTGCCTCAACAGACAGGGATTTCGTATCTGATATTAGCTTAGGAAATGGGGTTAACATCAAGGGTGAGAGTCTGAGTCTCTTGGAAATGAAAGCCAAGACAAGGATACTTCCTGCATCTGAAGCCTTCGCAGGATATTTCACCCCTTATCAATCCAGTTATTGTGTAGACAGTTCCCTGAATGCGTCCAAGGCAAAAGGGAATGTTCTGGTGTGTCGACATTCAGAGAGTTCAACAGAGTCAAAATTAGAGAAGAGTAAGGTGGTGAAACAGGCTGGAGGAGTGGGGATGATACTTATTGATGAATTAGATCTAAAGGTTGCCGTCCCATTTGTAATTCCTTCAGCCATCGTAAGAACGAAAACCGGAGAAAGGATTCTGTCTTATGTTAATAGCACACGTAAGCCCATGTCAAGGATTTTTAGAGCAAAGACAGTGTTTGGAACTCAGCCTGCACCCCTTATGGCAACATTTTCTTCTAAAGGTCCCAACTCTTTGACTCCTGAAATTTTGAAGCCTGATGTCACAGCTCCGGGATTGAACATCCTTGCCGCATGGTCACCAGCTAAAAGGAACATAATGTATAACATTCTCTCAGGAACCTCTATGTCTTGTCCCCATGTAACTGGAATTGCAGCCTTAGTCAAAGCTGTTCATCCTTTGTGGTCGCCATCTGCTATCAAATCAGCCATCATGACAACTGCTACAACTCTGGACAAACAACATAAACCCATACGAGCAGATGGTGGACGAAGAAAAGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAATGTTCTTGATCCTGGCCTCATCTATGATACAAAGCCAGAAGATTACATAGAGTTCCTCTGTTCACTAAATTATGATGACAAGTCGCTCCGGCTTGTTACCAGAGACAACAGTACACGCAATGGCCGTAGAAAATTCAAAACTGCCTCTGACCTCAACTATCCATCTATTACATTGGCTTCATTGATACGGGAATTTGGCCAGAATCCCCAAGTTTTAAAGACCCAGACATGCCTCCAGTGCCATCCAAATGGAAGGGACATTGTCAAACAGGAGAAGCTTTCAACGCTTCATCTTGCAACAGGAAAGTGA 2139 0.4474 MFYSSHARGRIAIAYLFLAVISAETRFCFCSKVYVVYMGSKTGEDPDDILKQHHQMLTSVHRGSVEEAQASHVYSYRHGFRGFAAKLTDEQANQISDMPGVVSVFPNSKRILHTTYSWDFMGLPDDENMKIFGHSNRNQANVIVGFIDTGIWPESPSFKDSDMPPVPSEWKGHCQTGEAFNASSCNRKVIGARYYASGFVAEEGLENKFSYKSPRDSSGHGSHTASIAAGRHMENMNYTGLGAGKARGGAPKARIAVYKTCWDSGCYDADLLAAFDDAIRDGVHILSLSLGSEAPQGDYFSDAISVGSFHAASHGVLVVASAGNNGNPGSAANLAPWMTTVAAASTDRDFVSDISLGNGVNIKGESLSLLEMKAKTRILPASEAFAGYFTPYQSSYCVDSSLNASKAKGNVLVCRHSESSTESKLEKSKVVKQAGGVGMILIDELDLKVAVPFVIPSAIVRTKTGERILSYVNSTRKPMSRIFRAKTVFGTQPAPLMATFSSKGPNSLTPEILKPDVTAPGLNILAAWSPAKRNIMYNILSGTSMSCPHVTGIAALVKAVHPLWSPSAIKSAIMTTATTLDKQHKPIRADGGRRKANAFDYGSGFVNPANVLDPGLIYDTKPEDYIEFLCSLNYDDKSLRLVTRDNSTRNGRRKFKTASDLNYPSITLASLIREFGQNPQVLKTQTCLQCHPNGRDIVKQEKLSTLHLATGK 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1170g00004 712 CDD Peptidases_S8_3 112 578 IPR034197 -
Pral1170g00004 712 Pfam PA domain 385 468 IPR003137 -
Pral1170g00004 712 Gene3D Peptidase S8/S53 domain 141 625 IPR036852 GO:0004252|GO:0006508
Pral1170g00004 712 FunFam Subtilisin-like protease SBT5.3 23 113 - -
Pral1170g00004 712 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
Pral1170g00004 712 SUPERFAMILY Subtilisin-like 112 616 IPR036852 GO:0004252|GO:0006508
Pral1170g00004 712 CDD PA_subtilisin_like 353 482 - -
Pral1170g00004 712 FunFam Subtilisin-like protease SBT1.5 141 358 - -
Pral1170g00004 712 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Pral1170g00004 712 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Pral1170g00004 712 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Pral1170g00004 712 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Pral1170g00004 712 Pfam Subtilase family 141 591 IPR000209 GO:0006508|GO:0008236
Pral1170g00004 712 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 669 IPR045051 -
Pral1170g00004 712 Gene3D - 629 686 - -
Pral1170g00004 712 ProSiteProfiles Serine proteases, subtilase domain profile. 117 612 - -
Pral1170g00004 712 Gene3D - 347 489 - -
Pral1170g00004 712 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 113 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1170g00004 Pral-Chr1170 94594 161023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1170g00004 16 674 Subtilisin-like Serine Gene Family AT4G10520 44.510 7.99e-176 519