Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1168g00002 ATGGCTACTGCTAGAACTGTCAAGGACGTCTCGCCTCATGAGTTCGTGAAGGCTTATTCTGCTCATCTCAAGCGATCTGGCAAGATGGAGCTTCCCGAGTGGACAGATATTGTGAAGACTGCAAGATTCAAGGAGCTGGCTCCATATGATCCTGATTGGTACTATGTCAGGGCTGCCTCCATGGCTAGGAAGATCTACTTGAGAGGGGGTCTTGGTGTTGGTTCTTTCCAGCGGATCTATGGTGGGAGCCAGAGGAATGGTAGCCGTCCCCCTCATTTCTGCAAGAGCAGTGGTGCTATTGCTCGTCACATTCTTCAGCAGTTGCAGAGCATGAACATCATTGAAATCGATGCCAAGGGTGGCAGGAAAATCACTTCAAATGGTCAGAGGGATCTTGACCAAGTGGCTGGAAGGATTGTGGTGGCCCCTTGA 432 0.5046 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLQSMNIIEIDAKGGRKITSNGQRDLDQVAGRIVVAP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1168g00002 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Pral1168g00002 143 FunFam 40S ribosomal protein S19 2 143 - -
Pral1168g00002 143 PANTHER 40S RIBOSOMAL PROTEIN S19 2 139 IPR001266 GO:0003735|GO:0005840|GO:0006412
Pral1168g00002 143 Gene3D - 1 142 IPR036388 -
Pral1168g00002 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
Pral1168g00002 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Pral1168g00002 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1168g00002 Pral-Chr1168 4228 6085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1168g00002 1 143 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 82.517 8.39e-93 263