Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1165g00001 ATGGCTGGAACTGGAGTGTTCGCTGAGATTTTAGATGGAGATATGTACAAGTACTACTCTGATGGCCAATGGAAGAAGTCCTCTTCTTCTAAAAGTGTTTCCATCATCAATCCCACTACCAGAAAGACTCAGTACAAAGTTCAAGCCTGCACACAAGAAGAGGTCAATAAAGTCATGGACTTGGCAAAATCTGCTCAGAAGTCATGGGCGAAGACCCCGCTGTGGAAACGAGCTGAACTCCTCCACAAGGCAGCTGCTATCCTCAAGGAGCACAGGGCTTCAATAGCAGAGTGCCTGGTGAAAGAAATAGCAAAGCCAGCCAAAGATGCGGTTACTGAGATCAGGGATCTGGTCTCATACTGTGCTGAAGAAGGTGTAAGGATTCTGGGAGAAGGAAAGTTCTTGGTATCAGATAGTTTTCCTGGAAATGAAAGGACAAAATACTGTCTGACATCCAAGATTCCATTGGGAGTGGTTTTAGCCATTCCACCATTTAACTACCCTGTCAACCTTGCTGTGTCAAAAATTGCTCCTGCGCTGATTGCTGGAAACTCCATTGTGCTGAAGCCTCCAACTCAGGGAGCTGTTTCTGCACTACATATGGTGCATTGCTTTCACTTGGCTGGTTTCCCCAAAGGCCTAATCAGTTGTGTTACTGGCAAAGGATCTGAGATTGGTGACTTCCTTACTATGCATCCAGGAGTTAACTGTATAAGCTTCACTGGAGGAGATACTGGGATTTCAATTTCAAAGAAAGCAGGCATGATTCCTCTGCAAATGGAGTTGGGAGGAAAAGATGCCTGCATTGTGCTTGAAGATGCCGATCTGGATTTGGTGGCTGCAAATATTATAAAGGGAGGCTTTTCTTACAGTGGTCAGAGGTGCACTGCTGTTAAGGTTGTCCTAGTGATGGAATCCATTGCCGATGCTCTGGTAGAGAAAGTGAAGGCAAGAGTCGCAAAACTGACCGTTGGGCCACCTGAGAATGACTGTGACATCACTCCAGTTGTGTCAGAATCGTCAGCCAATTTCATTGAAGGTCTAGTTATGGATGCTCAGCAGAAAGGAGCAACCTTTTGCCAGGAATACAGAAGAGAAGGGAACCTGATTTGGCCTTTGTTGCTGGACAATGTGAGGCAGGATATGAGAATAGCTTGGGAGGAGCCATTTGGACCAGTGTTGCCAGTTATTAGGATCAATTCTGTTGAAGAAGGAATTCACCATTGCAATGCTAGCAATTTTGGACTTCAGGGTTGTGTGTTCACAAAGGATGTGAACAAAGCAATTTTGATCAGTGATGCAATGGAGACGGGAACAGTTCAGATAAACTCTGCCCCAGCTCGTGGACCTGATCATTTTCCCTTCCAGGGTATCAAGGACAGTGGAATTGGATCCCAAGGCATTACCAACAGCATAAACATGATGACCAAAGTAAAGACAACAGTAATCAATTTGCCCACCCCTTCTTATTCCATGGGTTGA 1482 0.4528 MAGTGVFAEILDGDMYKYYSDGQWKKSSSSKSVSIINPTTRKTQYKVQACTQEEVNKVMDLAKSAQKSWAKTPLWKRAELLHKAAAILKEHRASIAECLVKEIAKPAKDAVTEIRDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESIADALVEKVKARVAKLTVGPPENDCDITPVVSESSANFIEGLVMDAQQKGATFCQEYRREGNLIWPLLLDNVRQDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDVNKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYSMG 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1165g00001 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 480 IPR016162 GO:0016491
Pral1165g00001 493 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 22 278 - -
Pral1165g00001 493 SUPERFAMILY ALDH-like 15 484 IPR016161 GO:0016491
Pral1165g00001 493 CDD ALDH_F11_NP-GAPDH 16 484 - -
Pral1165g00001 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 260 267 IPR029510 GO:0016491
Pral1165g00001 493 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 264 454 - -
Pral1165g00001 493 Pfam Aldehyde dehydrogenase family 24 480 IPR015590 GO:0016491
Pral1165g00001 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 264 454 IPR016163 GO:0016620
Pral1165g00001 493 PANTHER ALDEHYDE DEHYDROGENASE 1 492 - -
Pral1165g00001 493 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 288 299 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1165g00001 Pral-Chr1165 243 4903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1165g00001 1 493 Aldehyde Dehydrogenase Gene Family AT2G24270 89.718 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1165g00001 K00131 - qsa:O6P43_003000 935.25