Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1164g00001 ATGACAGTTGGTGGAGGGGAGAAGGAAGAAACGGGGAAGAAGAAAATGGATGATGATGATGATAGCGGAGCTTGGAGCAGCGATAATAAGTGGGATACCCCTCCTCTTCCTAAGGTTCAAGTGGGCGGTTCCCCTTTGTATAAAGTAGGAAGAAAACTGGGGAAGGGTGGATATGGACAAGTATATGTTGGTCGCCGTGTTAGTGGTGAAAATATGAATGAGAGAACTGGACCTGAAGCTGTGGAGGTCGCATTGAAATTTGAGCATAGGGGACCACCAGACGAGTGGCGAGTGTACGACACCGTAGGTGGCAGCCATGGTGTGCCAAGAGTACACTACAAGGGTGAGCAAGGTGGCTATTATATCATGGTTATGGATATGCTGGGACCTAGCTTGTATGATGTGTGGAAGAAGTCTCATATAATGTCCATTCAAACGGTTGCATGCATTGCCATTGAAGCAATATCCATACTTGAGAAGATGCACTCTCGAGGGTATGTGCATGGTGATGTGAAGCCTGAAAATTTTCTGCTTGGTTCTCCAGGGACCCCGGATGAGAAGAGATTGTTTCTTGCTGATCTTGGATTAGCATCTAGATGGTGGGATGAATTAACAGGTTCACATCTGGAGTATGACCAAAGGCCATATGAATTTAGGGGCACAGCCCGCTATGCAAGTGTGCATGCACATTTAGGGAGAACTCCTAGCAGGAGGGATGATCTGGAATCCCTTGCTTATACATTGATTTTCCTTCTTCGAGGTCGTCTTCCTTGGCAGGGATACAGGGAGCAGGGAGAAAACAAACATTTTTTGGTTTGCAAGAAGAAGATGGAAACTACTCCAGAGTTCTTATGTGGCTTCTTCCCCCAGCCTTTTAGGCTTTTTCTTGAACATGTAGTAAATCTGAAGTTTGACGAAGATCCTGACTACGCAAAATATATTTCTCTGTTTGATGGGATTGTTGGTCCAATAAATCCAGATATCAGACCCATCAATACAGAAGGTGCACAAAAGCTCATTATTGGTCACAAGAGAGGTCAGTTGGCCACGGAAGAAGGGAACGATGAACAACCAAAAAAGAAGTTGCGAATGGGTCTACCAGCAACACAATGGATAAGTATATATGATGCTCGCAGACCAATGAAACAGAGATATCACTACAACGTGTCAGATGCAAGAATTTCCCAGCTTATCGGAAAGGGAAATGAGGATGGCTTATATATAAGTAGTGTGGCTTCATGTTCGAACCTGTGGGCAATAATCATGGATACAGGCACTGGTTTCAAAAAACAAGTTTATGAACTCTCTCCTTACTTTCTTGATAAGGAATGGATAATGGAACAGTGGGAAAAAAATTACTTAATCAGTGCAGTTGCTGGAGCCAAGAACGGGAGCTCAATAGTAGTCATGTCTAAAGGCGCACCATATATACTACAATCTTTCAAAGTTAGCAATTCATTTCCTTTCAAGTGGATTAAGACAAAGTGGGGGGAAGGCTTCCATGTTACTGCAATGGCTACCTCAGGGGTCAGATGGGCTGTGGTTATGTCACGCGGTACAGGATTTCGCCACCAGGTGGTTGAACTGGATTTTCGTTATCCCGGTGAAGGGATTCGCAGGCGATGGGATCACGGATACCGCATAACAGCAGCCGCTGCAACTTCTGACCAGGCTGCTTTTGTGCTCAGTAAGCCATGGAGGAAGCATGCAGATGAAACACAGGAAACCTTGAGGACTGCCCTTTTTCCTACCATGCATGTGAAGGACAAATGGGCAAGCAACCTTTATATTTCATCAGTTTGCTATGGGCGAACTGTCTCTCGATGA 1827 0.4494 MTVGGGEKEETGKKKMDDDDDSGAWSSDNKWDTPPLPKVQVGGSPLYKVGRKLGKGGYGQVYVGRRVSGENMNERTGPEAVEVALKFEHRGPPDEWRVYDTVGGSHGVPRVHYKGEQGGYYIMVMDMLGPSLYDVWKKSHIMSIQTVACIAIEAISILEKMHSRGYVHGDVKPENFLLGSPGTPDEKRLFLADLGLASRWWDELTGSHLEYDQRPYEFRGTARYASVHAHLGRTPSRRDDLESLAYTLIFLLRGRLPWQGYREQGENKHFLVCKKKMETTPEFLCGFFPQPFRLFLEHVVNLKFDEDPDYAKYISLFDGIVGPINPDIRPINTEGAQKLIIGHKRGQLATEEGNDEQPKKKLRMGLPATQWISIYDARRPMKQRYHYNVSDARISQLIGKGNEDGLYISSVASCSNLWAIIMDTGTGFKKQVYELSPYFLDKEWIMEQWEKNYLISAVAGAKNGSSIVVMSKGAPYILQSFKVSNSFPFKWIKTKWGEGFHVTAMATSGVRWAVVMSRGTGFRHQVVELDFRYPGEGIRRRWDHGYRITAAAATSDQAAFVLSKPWRKHADETQETLRTALFPTMHVKDKWASNLYISSVCYGRTVSR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1164g00001 608 ProSiteProfiles Protein kinase domain profile. 47 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1164g00001 608 Pfam Protein kinase domain 47 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1164g00001 608 ProSitePatterns Protein kinases ATP-binding region signature. 53 86 IPR017441 GO:0005524
Pral1164g00001 608 CDD STKc_CK1 47 317 - -
Pral1164g00001 608 PANTHER CASEIN KINASE-RELATED 29 568 - -
Pral1164g00001 608 MobiDBLite consensus disorder prediction 7 26 - -
Pral1164g00001 608 MobiDBLite consensus disorder prediction 1 43 - -
Pral1164g00001 608 Gene3D Transferase(Phosphotransferase) domain 1 32 363 - -
Pral1164g00001 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pral1164g00001 608 SUPERFAMILY Protein kinase-like (PK-like) 47 325 IPR011009 -
Pral1164g00001 608 SMART serkin_6 47 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1164g00001 Pral-Chr1164 15040 20029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1164g00001 37 260 MAP Kinase Kinase Kinase AT5G50180 25.941 1.53e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pral1164g00001 Pkinase 1.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1164g00001 - - cit:102627154 922.154