Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1161g00003 ATGGCTATCGCTGTTTTGGCTTTTATGCTATTACTGCAGTTGCCAAGAATTTTTGGCTCTGGGGACTTGTTGCAGGCAAAGGATTGTGGTGCCAATTGGGTAGCCTATTCATATTCTTATGGTCATGAACTATTTTACATAAACGGGAATGTTGTTAGCAAAGACAATTTCTGCAGGACCCTTCAGTTTTACATGGTAAATGGTTGTGATGCGAAGCACTATTTTGGAAGTACACGCTGTGGGCGGGAAGTTTCTTTTGGAAGAAAGCTTTTGCAGAAGGATATAAGCGATAACTCAACATTCCCAGGTCCCCAAAACGTTTCTAAGCCCCTAGCACCCTCAAAAGTTGGTATAGTTGCAAGTGGGGTTTTGCTTGTATGTTGTGTTTTTCTCTGTCCTTGTTTCTATGGGAAGAGACAAAAAGGCACTGCTCATGCTGGTCCATCCAAGGACCCAAATTCAATGGATTCAGCTTCTTCTTTGGAAGGGAACTCTGTTTCTGAGAAGATCCATGGCTCTCTCCATAGGGTACCACCTAGTCCTTCAAGATTTTCAATGTCTCCAAAACTCAGTAGACTTGGGTCAATACATCTCAACTTGAGTCAGGTTGTGAAAGCTACTCATAATTTCTCGAATAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGCTAGAAGGTGGTCAAGTTGTGGCAGTAAAGCGTGCCAAAAGGGAACATTTTGAGAGTTTGAAAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACCTGGTGAAGTTACTAGGTTACATTGACCAAGGAAATGAACGCCTTCTTATTGCAGAGTATGTCCCAAATGGTACTCTTAGAGAACACTTGGATGGTTTGCGTGGAAGGATCCTTGACTTCAATCAGCGCCTTGAAATTGCCATTGATGTTGCTCATGGCCTGACCTATCTACATCGTTACGCAGAAAAGCCAATTATCCATAGAGATGTGAAATCGTCCAACATTCTTCTAACTGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGATTTGCAAGACTTGGTCCAATGGACTCTGATCAAACACACATCTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCAGAGTACATGAAAACATATCAGCTTACTCCCAAGAGTGATGTTTATTCATTTGGGATTTTGCTTTTAGAAATTGTGACCGGCCGCCGTCCTGTGGAGGTGAAGAAACCTGTTGAAGAGAGGGTGACATTGAGATGGGCTTTCAGGAAGTATAATGAAGGGAATTTGGTGGAAATGGTGGATCCTTTAATGGAGGAAGGTATAAATGGAGAGGTTGTAATGAAGATGATTGGTTTAGCAATTCAATGTGCAGCACCAACTCGAGCTGATCGGCCCGACATGAAGTCCGTGGGAGAACAACTGTGGACGATCAGGGCAGAATTCCTCAAAAGTTCAAAGAGAGTATAG 1491 0.4239 MAIAVLAFMLLLQLPRIFGSGDLLQAKDCGANWVAYSYSYGHELFYINGNVVSKDNFCRTLQFYMVNGCDAKHYFGSTRCGREVSFGRKLLQKDISDNSTFPGPQNVSKPLAPSKVGIVASGVLLVCCVFLCPCFYGKRQKGTAHAGPSKDPNSMDSASSLEGNSVSEKIHGSLHRVPPSPSRFSMSPKLSRLGSIHLNLSQVVKATHNFSNKLQIGEGGFGTVYKAQLEGGQVVAVKRAKREHFESLKTEFSSEVELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDFNQRLEIAIDVAHGLTYLHRYAEKPIIHRDVKSSNILLTESMRAKVADFGFARLGPMDSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVEVKKPVEERVTLRWAFRKYNEGNLVEMVDPLMEEGINGEVVMKMIGLAIQCAAPTRADRPDMKSVGEQLWTIRAEFLKSSKRV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1161g00003 496 ProSiteProfiles Protein kinase domain profile. 210 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1161g00003 496 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 114 488 - -
Pral1161g00003 496 Pfam Protein tyrosine and serine/threonine kinase 214 482 IPR001245 GO:0004672|GO:0006468
Pral1161g00003 496 SUPERFAMILY Protein kinase-like (PK-like) 193 485 IPR011009 -
Pral1161g00003 496 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
Pral1161g00003 496 SMART serkin_6 210 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1161g00003 496 Gene3D Transferase(Phosphotransferase) domain 1 287 495 - -
Pral1161g00003 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Pral1161g00003 496 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 287 496 - -
Pral1161g00003 496 CDD STKc_IRAK 216 482 - -
Pral1161g00003 496 MobiDBLite consensus disorder prediction 143 162 - -
Pral1161g00003 496 Gene3D Phosphorylase Kinase; domain 1 181 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1161g00003 Pral-Chr1161 25203 30205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1161g00003 118 486 Receptor kinase-like Gene Family AT3G46290 39.894 8.88e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pral1161g00003 PK_Tyr_Ser-Thr 4.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1161g00003 - - gmx:100798260 718.383