Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1158g00005 ATGGCTTCCACTCATTCCTTCCTCCTCTTCTCTATTCTCCTTCATCTTCATTTTCACTCCTCAAGTTCACAAAGTTGGGTCAAAGCTGGTTATTGGTATGCTGGCAGTGAATCCCCCATTCCTGACATAAACTCTGCTTTGTTCACGCACCTTATATGCGCCTTCGCTAGCGTCAATTCCTCAACTTACGAGATTTCCATAGCCAAATCTGACCTGCAATATTTCTCCACCTTCACCAACATCGTCAAGAGTAAAAACCCCTCTATCGTCACTCTTTTCTCTGTATGGAACGGACAGGCAGAAACTGCACAGGGTATTCTGGGCAAGAAGGCGAACGATTCGTTCCTTTCTTCTATGCTCCGAACCGCTTCTTCACGAAAATCTTTCATTCAGTCCTCCATACAAACAGCTAGACGATATGGGTTTCAGGGCATTGACTTGTTCTGGCTTTGGCCTCAAGCAGAATCGGATATGACCAACTTGGGAATTCTGCTTCACGAATGGCGACTTGCTGTGGATTCTGAGAACAGAAGCTCTGGAGAATCGTCGTTGATATTGAGTATGGGTCTTCATTACTTGCCCACTGTTTTTGGGAATCTGAGTTATCCCGTTGATTCTTTGGTCAAGAATCTGAACTGGGGTCATATTCTGGCTTATGATTATCATCTTCCGTCACTGGAAAATTTCACGCATCCTCATGCTGCTCTGTATGATCCTACAAGCCATGTGAATACTGATTTTGGTATAAGGAAATGGCTGAGCAGAGGATTTCCTTCTAATAAGCTGCTTCTGGGATTGCCTTACCATGGCTACGCTTGGGCATTGGATAGTCCCAAGGAAACCGCGATTGGTTCCCCATCATCGGGCGTGGCTGTGACACAAGATGGGTCTATGAGCTACAAGTATATCAAGTGGTATGTTCGGAGTTATCGTGCACCTACGTTGTATAATGCTACCTATGTCGTGAATTATTGCACCATTGGTTCTATTTGGATCAATTTTGATGACGTTGAAGCTATCAAAACTAAGGTTGCTTATGCCAAGGAAAAGAATCTGCTGGGTTACAATGTGTTTCAGGTGATAAATGATGATAATTGGGTGCTTTCCGAGGCAGCTCAAGATGAAGAAACTGATCAGGGAAACAGACGGAGGCTATTACTTATTATTTTACTTCCAGTTGCAATCGTCATAACATTGGCAGTCTTTCTTCTGTGCTGCTTCAGAAGCAAGTCATTCAAATCAAAAGTGAAGATGGTGTTTGGCAAAAGTTTGCTGTCTGAACCAGAAGGTCCCATGCCGCATGCTGAGAGCATTGAAGCCAGTGCTCCACATCTTGAAGAATTTAGCTTTGCCGTCATAAGAGCGGCAACAAAAGACTTTTCTGTAGAAAACAAGCTAGGAGCGGGTGGATTTGGCTCTGTTTACAAGGGAGAACTACCAGGAGGACAAGAAATTGCAGTCAAGAGACTTTCGAAAGCTTCCACCCAAGGACATGAAGAATTTACAAATGAGGTTTCACTTACTGCAAGGCTTCAGCATATCAATCTGGCTAGAGTTTTGGGATTCTGCAATGAGAGAGAAGAAAAAATTCTAATCTATCAGTACATGCCTAACGGAAGCTTGGATTTCTACCTCTACGATCCAATAAGAAAGCACCTATTGGATTGGGGGAAGCGTGTTCATATTATTGAAGGAATTATCCAAGGGCTTCTGTATCTCCAAGAATTTTCAAACTTCACAATAATTCATCGAGATTTAAAAGCTAGCAACATCTTGCTTGATGATAAGATGAATCCAAAAATATCAGATTTTGGTATGGCTAAACTTTTTAGAAAAGATGAAGTTGAAGCAAATACTGGGCGAATCGTTGGGACATATGGTTATGTTCCTCCAGAATATGTCAGAAAAGGCACATACTCAATGAAGTATGATGTTTATAGCTTTGGAGTACTGCTTTTGCAAATCATCAGTGGCAAGAGGAACACTAGCTATTATGGCACTCATGAGAACTTGAGCATTCTTGAATATGCTTATAATTTGTGGAAAGAGGGTAAAGGTTTCGAATTTGTTGATCCATCTCTAGAAGATTCATCTTCTTCCTGCAAACTTCTGCAATGTTTGCATGTTGCCCTACTCTGCGTTCAGGAAAATCCAGTAGAAAGGCCATCCATGCTGGAGGTTTCTTCCATGCTTAAGAATGAAACTGAGGCAATTCCTTTGCCTAAAAAGCCAGCTTTCTCAACAAAAAGTAATGAAAAATTAGAAGACAGATCCTCAACATCACAGTCACAGAAAGGA 2298 0.4186 MASTHSFLLFSILLHLHFHSSSSQSWVKAGYWYAGSESPIPDINSALFTHLICAFASVNSSTYEISIAKSDLQYFSTFTNIVKSKNPSIVTLFSVWNGQAETAQGILGKKANDSFLSSMLRTASSRKSFIQSSIQTARRYGFQGIDLFWLWPQAESDMTNLGILLHEWRLAVDSENRSSGESSLILSMGLHYLPTVFGNLSYPVDSLVKNLNWGHILAYDYHLPSLENFTHPHAALYDPTSHVNTDFGIRKWLSRGFPSNKLLLGLPYHGYAWALDSPKETAIGSPSSGVAVTQDGSMSYKYIKWYVRSYRAPTLYNATYVVNYCTIGSIWINFDDVEAIKTKVAYAKEKNLLGYNVFQVINDDNWVLSEAAQDEETDQGNRRRLLLIILLPVAIVITLAVFLLCCFRSKSFKSKVKMVFGKSLLSEPEGPMPHAESIEASAPHLEEFSFAVIRAATKDFSVENKLGAGGFGSVYKGELPGGQEIAVKRLSKASTQGHEEFTNEVSLTARLQHINLARVLGFCNEREEKILIYQYMPNGSLDFYLYDPIRKHLLDWGKRVHIIEGIIQGLLYLQEFSNFTIIHRDLKASNILLDDKMNPKISDFGMAKLFRKDEVEANTGRIVGTYGYVPPEYVRKGTYSMKYDVYSFGVLLLQIISGKRNTSYYGTHENLSILEYAYNLWKEGKGFEFVDPSLEDSSSSCKLLQCLHVALLCVQENPVERPSMLEVSSMLKNETEAIPLPKKPAFSTKSNEKLEDRSSTSQSQKG 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1158g00005 766 SUPERFAMILY (Trans)glycosidases 27 375 IPR017853 -
Pral1158g00005 766 FunFam Uncharacterized protein 435 535 - -
Pral1158g00005 766 SUPERFAMILY Chitinase insertion domain 269 334 IPR029070 -
Pral1158g00005 766 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 270 761 - -
Pral1158g00005 766 Gene3D Phosphorylase Kinase; domain 1 430 535 - -
Pral1158g00005 766 ProSitePatterns Protein kinases ATP-binding region signature. 466 488 IPR017441 GO:0005524
Pral1158g00005 766 Gene3D Glycosidases 42 365 - -
Pral1158g00005 766 SUPERFAMILY Protein kinase-like (PK-like) 445 751 IPR011009 -
Pral1158g00005 766 MobiDBLite consensus disorder prediction 736 766 - -
Pral1158g00005 766 ProSiteProfiles Protein kinase domain profile. 460 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1158g00005 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Pral1158g00005 766 Pfam Protein kinase domain 461 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1158g00005 766 CDD STKc_IRAK 466 733 - -
Pral1158g00005 766 FunFam Chitotriosidase-1 268 334 - -
Pral1158g00005 766 SMART serkin_6 460 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1158g00005 766 SMART 2g34 26 363 IPR011583 GO:0008061
Pral1158g00005 766 Gene3D - 268 334 IPR029070 -
Pral1158g00005 766 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 379 IPR001223 GO:0005975
Pral1158g00005 766 FunFam Uncharacterized protein 536 740 - -
Pral1158g00005 766 Gene3D Transferase(Phosphotransferase) domain 1 536 743 - -
Pral1158g00005 766 CDD GH18_plant_chitinase_class_V 24 369 - -
Pral1158g00005 766 Pfam Glycosyl hydrolases family 18 30 360 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1158g00005 Pral-Chr1158 14159 18489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1158g00005 430 763 Receptor kinase-like Gene Family AT4G23150 50.888 9.38e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1158g00005 Glyco_hydro_18 1.3e-58 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1158g00005 - - jre:109019491 1056.59