Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00172 ATGGAAGTTCTCACTGCTATCGTTGGAAAAATAGCAGAGTTAACTTTTATGCCCGTTGGAAGGCAAGTGGAATATTTACTATTTTACAAAGGGAACTTGAAGGAGCTAGAGGATAAAATTGAGGAGTTGAAGACAAGAAAAGTTCGCGTCGAGCATGATGTTGAAGCAGAAAGAAGGAACGGAAGAGAGACTAAAGATGAAGTACTAAGTTGGCAAAACAGAGTTGACCATACCTTGGAAGACGTAGAGAAACTTCGCGATGATCAACCTCGTGCTAGTGTACAGTGTTGGAAATGGTCTTTTCCTAATTTGATATCTCGACATCAACTTGGCAGAAAAGCGAAAAAAATGACATTCACCATTGCTGAACTAAAGGACAAGGGGAAGTTTGATGGTGGAGTTGGGTATGTCCCCGCTTCTAGCATGGGAGGCTTAATTTTTGCAGCTCGAGGTAGTGAAAAGCTTGACTCAAGAAACTCAGTGAAGGAGGAGGTTATGTTGTCTCTAGCTGACCCCAAAGTAAGCAAAGTTGGAATTTATGGGTGGGGTGGAGTGGGGAAGACCACTCTAGCTAAAGAAGTTGCCAAACATGTTAAGGATAGAAAGCTATTTGATATGGTAGCTATGGCAACTATACCCCAACCGTTGGATGTTGAAAGAGTTCAAGATGAGATTGCATATCAATTAGGCTTCCACTTGGATGAGAAGACGTCAATTGGAAGAGCTGACCGCCTTTTTGCAAGGATAAAAATGGAGAAAAATATCCTTATCATACTAGATGACTTATGGGAGAAAATAGATTTGGACATGTTGGGAATTCCATCTGAGCAAGATCTTAAGGATGAAAAATTGTCATTAACTTCTAAACGTTTAGATATTTCGCAGAAGAATGAAACTTATCAAGGTTGCAAATTATTATTGACTTCTAGACGTTTGGATATTTTACAAAAGAATGAGACTCAAAGTAACTTTCATATAAAAGCATTAGATAATGCAGAATCATGGACTTTGTTTAAAGACATGGTTGGTGATGCTATTGAAGATGCTGATTTGCAGAACATAGCAACCCAAGTGGTTGAAAGATGTGCAGGTTTGCCTGTTATGATAGTCTCAATTGCAAAGTCACTAAAATTTAATAAGAATATTCATTATTGGAAAGATGCCTTGAACAACTTAAAGAGAGTTGATAATGAAGACAAAGATGGGATTGTTTTTTCAGCTTTTAAATTTACTTACAACCGCCTAGAAGATGATGAAATGAAGAAAGTATTCTTGCTATGTGGTGCCTATGGACCATCCATGTGGGTTAGTTACTTGTTAAAATTATTATTTGGTTTGGGGGTTCTGAAACACATAGATACCATTAAAGATGCAAGAAATCGACTGCACAAAATAATTGATGACTTGAAGGCATCTTGTTTGTTAATTGAGAATGATGCAAACAAGACCGATAGGATTACAATGCATGACATTGTCTGTGAAACAGCTGTTTCAATTGCTCGTAAGAGTGAACATGTTTTTGCATTGAGAAATGATAATATGCAAGATTGGCCAAGCAAGATATTTCTTGAAAGGTGTACTCAAATAATCTTAAGAAATTGTTTTATCCAAGAGCTTCCTCAAAAGCTAGACTGCCCTAATTTGAAATTTTTCCTCTTAACTTTTAGAAAGGGCTGCACTTTGGAAATTCCAGACTCTTTTTTCGAGGGAATGGGAAACCTTGAAGCATTAGATTTGACAGGCTTGATAATACCTTCACTGCCTATATCTCTTCTTTCCTTGACCAAGCTTAAAACTTTGTGTTTGGATCAATGCACTATGAAAAATATGGCTGGAATAGGTGACTTGACAAATTTAGAAATTCTTAGTTTTTGGGGTTCATACATGGTGGAGTTTCCTAGTGAAATAGGACAACTAACTCGTATAAAAATGTTGGAATTGACAAAGTCTAGAATTAAGATCATCCCACCCAACACTTTATCCAAATTGACTAAAATAGAGGAGCTTTATATGGGCAATGCCTTAGTTAAGTGGGGGGAGGAAAGTTCAGCTGAGCAAAACAAAAGTGCTTGTCTTGCTGAGCTTGGGTGTTTGACAAGCCTGACTGCTTTAGAAATTCAAATTCCTGAGGCTTGGATGCTTTCGAGGGACATGATGTTTGAAAACTTAGAGAGATACAAGATTGTCATCGGAGATAAATGGGAATGGTCGAGGAACAAAAGTACCTCAAGGTTGCTAAAGCTAAAGCTTGGTACTAGCATTCATTTAGAACATGGGATTAAAGCATTGATTAAACAAGTGGAAGATTTGTACTTAGATGAAGTCAATGGAATTTCAGATGTGCTTTTCGATTTGAATGCAGAAGGATTTCCTCTACTAAAGTATCTCCATATCCAAAATAATGACCAGGTTCAGCATATCATCAACATAACAGAGGGGAATGAAACTCATGTTTTGTTTCCAAAATTGGAGACACTAGTACTTCACAATCTTCATAACTTAGTGAAGATATGTCATGGCCCACTTCCTGTTAATTCCTTTGGCAAACTCACAGTCATCAAAGTTAAAAGTTGTGACCAACTGGTATATCTCTTTTCTGTTATAATGGTGAAAGCTCTTTCTCAACTTGTTGAGCTCCAAGTTTTGGAATGCAGTTCAATGAAGAGGATTGTGTTAATTGAAAATGTCGATAGTGGACTAATTAGTGATGAGAAGATTGAATTTCATTCACTGTGCTCATTGAGTCTTTGTCATTTGCCAGTCATCCATGACTTTTGCTCAAATGAATTGACATCTTTTATGACAGCCACATCATTATTTAATGGCACTAAGAGGCCTCAAGCATTTATTCTCATCTTTGTGGTTGGGAGTCTTTCAAAACTCAAACACCTTGAAATAAGTAAATGTGATATGATGGAGGAAATCATTGCTCCAGATAGCCTTGCAACACAAGAGGTCCGGTTCACAAAGTTGGAGACCATGGTAGTTAAAGACATGGAAAGCTTGAAGAAAGTATGGCACTCTCAATTTGATAGGTTAAAGAGCTTGGAGGTAAGCAATTGTGGGAAACTTGCGAATATTTTCCCATCTGATCTGCAGGGAACGTTTGGAAGCCTCGAGACATTGAAGGTCAGCGATTGTGGTTCAGTAGAAGAGATATTCGAATTAGCTTCCAAAGAAATCCGTAACGAAGACGAAACAACCGCACAAGTCTCACAATTGAAGAAACTCCATCTGCTTGGCTTGCCAAAGCTGAAACACATTTGGAGTAGAGATGCTCAAGCAAACCTTCGTTTTCATAATTTGCAACTTGTGCGCGTTGAAGACTGTGAGAACTTGGAATACCTTTTTCCATTCTCCATCGCAATGCAAGCTACTCAACTAGAACATATTATCATAAAATATTCAGGGAGGATGAAACATATTGTTTCAGGCAACAAAGTGATCCCCATGGACAGTCCAGTCAAATTTGAGTTTAATCGCCTGACCTCTTTGGTGTTTTGGAATTTATTGGAACTTGAAGGACTTTATGCTGGAAAACATAGTTTACTATGTCCATTATTAAGGGCATTAGATGTCCGCATGTGTTTGAAATTGAAGCTCTTCAAGACACAAGGTACGAGAGCCCGAGATAGAGTTTTTGATGGTAAACAGCAAATCTCAATGCAGCAGCCTCTTTTTACACTTGAAGAGGTGATTTGCAACTTGGAGAAGTTAGCCCTAAATAGTGAGGATGCAAGCATAATATCACAAGGACAACTTGCAAGAAAACACTTCAGGAAGCTCAAAATTCTTTATTTGGCAAATTTTGAAGATGATCACGCTACTTTTCCCTATTGGTTTCTCCAAAACGTAACCACTCTCAATGAGCTACTTGTTGAAAAGAGTTCTTTCAAGGAGATATTCCGAGAAGAAATACCTATACAGGACAAAGGAAAATTTAAGATCGGAACACGAATTAAATCATTGGCACTCCATCGATTGGATGATCTGGAGCATATATGCAAAGAAGGATTTCAAATAGACCCGGTTCTTGAAGAGCTTGAATACTTAGATGTGGATCGATGTTCCAAATTGAGACACTTAGTGCCTTCCTCTGTTACTTTTAGTCACTTGACATATTTGGCAGTGAAAAATTGCAAGGGATTGATTCACTTAATGACCTTATCAACTGGAAGAAGTCTGGTCAAATTAACAACAGTGAAAATAAGGAACTGCGATTCACTTGAGCAAGTTGTGGTGGCAGAAGAGAGGGAAGGGTCTGAAAATGAAATTGCATTTAACAGCTTACAAATTTTGGAGCTTGAGTGTCTGCCAATGATCAAGAGTTTCTGCTCTAGTAACTCTGTGTTGAACCTTCCATCACTAGTGAATGTTGTTGTTAAGCAGTGCCCAAGAATGAACATCTTCTCTATGAAAAGCGCAAGCACCCCAAGTCTTCGAGAAATACAATCAAAGGAAGAAGATGAAAAGATGTACTGGGAAGGTGACATAAACAGAACAATAAACAAGATGTTTGTGGATATGGTGGCATTCCATAGTTTTGAGCAGTTAGAGCTATCTCAGTATCCAGAGTTAAGAGAATCGTGGTACAACCTTGTTCAACAGGGAGTGTTTGTTAATTTGAGGAATCTGGTAGTGCAGAGATGTGATTTTTTATCAGATGTGCTTCTGCCTTTAAATTTGGTGCAAGCGCTATCCAACTTGGAGGAGCTTCAAGTAAGTGAATGTGAGTCATTGGAAGTTGTGTTTGATCTGACCAACATGGATCAAAAGGAAGTCTTTGTTAAGGAGACCATTCCGCTGAAGAGAATAACTCTCTCTAGACTATCTAAGCTCAAACACGTATGGAAACAGAACTTCCAAGAAACTGTCAGTTTTAGAGAAACAACAGAAGGTCATATCCAGCGTCACCGTCCAGCATGTTCCATTCAACAGAAAGAACTCCGTGGTGCTGAACTGTCTTCGGTTGCTGATGTGGGAGAAAGAATAGGAATTGGTTGTGCTGCTGCTTTTTCCGTGTCTTGGCCGTTGCCTGCTGTATGTTGCCCCAATTTGAAGCTTGTGTGTGTTGAAGACTGTGAGACCATGGAATACCTTTTTCCACTCTCCATTGCAATGCAAGCTACTCGACTTGAACGTATTACCATAAAGCATGCTAGGAGTATGAAACATATTGTTTCAGGCAAAGAAGGCCTCATCGACAGTCCTATTAAATTTGAGTTTAATCACTTGACCTCATTGGTGCTTTGGGGTTTATATGAACTGGAGGGATTTTTTGCTGGAAATCATAGTGTGCTATGTCCAGTATTAAGGGAATTAGATGTCCGCTTTTGTGTAAAATTGAAGCTCTTCAAGACTCAAAGTACAAGGGGCCAAGAAAGACTCTTCGATAGTAGACTCTACATCTCAATGCAGCGGTCTCTTTTCACACTTGAAGAGGTATAG 5448 0.3862 MEVLTAIVGKIAELTFMPVGRQVEYLLFYKGNLKELEDKIEELKTRKVRVEHDVEAERRNGRETKDEVLSWQNRVDHTLEDVEKLRDDQPRASVQCWKWSFPNLISRHQLGRKAKKMTFTIAELKDKGKFDGGVGYVPASSMGGLIFAARGSEKLDSRNSVKEEVMLSLADPKVSKVGIYGWGGVGKTTLAKEVAKHVKDRKLFDMVAMATIPQPLDVERVQDEIAYQLGFHLDEKTSIGRADRLFARIKMEKNILIILDDLWEKIDLDMLGIPSEQDLKDEKLSLTSKRLDISQKNETYQGCKLLLTSRRLDILQKNETQSNFHIKALDNAESWTLFKDMVGDAIEDADLQNIATQVVERCAGLPVMIVSIAKSLKFNKNIHYWKDALNNLKRVDNEDKDGIVFSAFKFTYNRLEDDEMKKVFLLCGAYGPSMWVSYLLKLLFGLGVLKHIDTIKDARNRLHKIIDDLKASCLLIENDANKTDRITMHDIVCETAVSIARKSEHVFALRNDNMQDWPSKIFLERCTQIILRNCFIQELPQKLDCPNLKFFLLTFRKGCTLEIPDSFFEGMGNLEALDLTGLIIPSLPISLLSLTKLKTLCLDQCTMKNMAGIGDLTNLEILSFWGSYMVEFPSEIGQLTRIKMLELTKSRIKIIPPNTLSKLTKIEELYMGNALVKWGEESSAEQNKSACLAELGCLTSLTALEIQIPEAWMLSRDMMFENLERYKIVIGDKWEWSRNKSTSRLLKLKLGTSIHLEHGIKALIKQVEDLYLDEVNGISDVLFDLNAEGFPLLKYLHIQNNDQVQHIINITEGNETHVLFPKLETLVLHNLHNLVKICHGPLPVNSFGKLTVIKVKSCDQLVYLFSVIMVKALSQLVELQVLECSSMKRIVLIENVDSGLISDEKIEFHSLCSLSLCHLPVIHDFCSNELTSFMTATSLFNGTKRPQAFILIFVVGSLSKLKHLEISKCDMMEEIIAPDSLATQEVRFTKLETMVVKDMESLKKVWHSQFDRLKSLEVSNCGKLANIFPSDLQGTFGSLETLKVSDCGSVEEIFELASKEIRNEDETTAQVSQLKKLHLLGLPKLKHIWSRDAQANLRFHNLQLVRVEDCENLEYLFPFSIAMQATQLEHIIIKYSGRMKHIVSGNKVIPMDSPVKFEFNRLTSLVFWNLLELEGLYAGKHSLLCPLLRALDVRMCLKLKLFKTQGTRARDRVFDGKQQISMQQPLFTLEEVICNLEKLALNSEDASIISQGQLARKHFRKLKILYLANFEDDHATFPYWFLQNVTTLNELLVEKSSFKEIFREEIPIQDKGKFKIGTRIKSLALHRLDDLEHICKEGFQIDPVLEELEYLDVDRCSKLRHLVPSSVTFSHLTYLAVKNCKGLIHLMTLSTGRSLVKLTTVKIRNCDSLEQVVVAEEREGSENEIAFNSLQILELECLPMIKSFCSSNSVLNLPSLVNVVVKQCPRMNIFSMKSASTPSLREIQSKEEDEKMYWEGDINRTINKMFVDMVAFHSFEQLELSQYPELRESWYNLVQQGVFVNLRNLVVQRCDFLSDVLLPLNLVQALSNLEELQVSECESLEVVFDLTNMDQKEVFVKETIPLKRITLSRLSKLKHVWKQNFQETVSFRETTEGHIQRHRPACSIQQKELRGAELSSVADVGERIGIGCAAAFSVSWPLPAVCCPNLKLVCVEDCETMEYLFPLSIAMQATRLERITIKHARSMKHIVSGKEGLIDSPIKFEFNHLTSLVLWGLYELEGFFAGNHSVLCPVLRELDVRFCVKLKLFKTQSTRGQERLFDSRLYISMQRSLFTLEEV 1815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00172 1815 Gene3D - 149 326 IPR027417 -
Pral1154g00172 1815 Gene3D Ribonuclease Inhibitor 739 887 IPR032675 -
Pral1154g00172 1815 Pfam NB-ARC domain 300 412 IPR002182 GO:0043531
Pral1154g00172 1815 Pfam NB-ARC domain 163 296 IPR002182 GO:0043531
Pral1154g00172 1815 PRINTS Disease resistance protein signature 176 191 - -
Pral1154g00172 1815 PRINTS Disease resistance protein signature 249 263 - -
Pral1154g00172 1815 PRINTS Disease resistance protein signature 956 972 - -
Pral1154g00172 1815 PRINTS Disease resistance protein signature 362 376 - -
Pral1154g00172 1815 Gene3D Ribonuclease Inhibitor 470 727 IPR032675 -
Pral1154g00172 1815 SUPERFAMILY L domain-like 955 1482 - -
Pral1154g00172 1815 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1233 1481 - -
Pral1154g00172 1815 Gene3D Ribonuclease Inhibitor 1471 1787 IPR032675 -
Pral1154g00172 1815 Coils Coil 26 60 - -
Pral1154g00172 1815 Gene3D - 328 416 IPR042197 -
Pral1154g00172 1815 Gene3D Ribonuclease Inhibitor 888 1381 IPR032675 -
Pral1154g00172 1815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 427 IPR027417 -
Pral1154g00172 1815 SUPERFAMILY L domain-like 488 925 - -
Pral1154g00172 1815 SMART AAA_5 173 330 IPR003593 GO:0016887
Pral1154g00172 1815 SUPERFAMILY RNI-like 1344 1726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00172 Pral-Chr1154 1370436 1380268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00172 177 485 WRKY Transcription Factor Family AT5G45050 23.476 1.70e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00172 - - pcin:129288205 1439.09