Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1154g00164 | ATGGTTGTGATCCAACCGGAAGAAACTGAGACTGAACGGAAAGTCGTGAATCCCTCTGAATCTGCAAAAACTGCAAAATCGTCAGCTTCATCCCATGTCGATGACCATAAAGAAGCTTCCGATGGCTTTGAAACCGCTAGCGACACCGAGCTCGGCAGCGACGCAGAGGATACGCATAATGAACGGGGACAACAACATCAAGATCAGGAGGTTGGGATTCCTCCGGGCACTGAGTCTTCCGAAGAGGCATCACACGACGAGGAATTGAAACAGAAAGCATTGGCTCAAGCGAATGATGCAAAATTAGAAGGAAATAAGCTATTTGGGGATGCGCGATTTGAGGAGGCATTATCAAAGTATGAACTTGCTTTACAAATTGCCCCAGACATGCCTTCATCTGTTGAAGTACGCTCAATATGCCATTCAAATCGTGCTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCATATCTGAAAGCTCTGGTGAGAAGAGGCGAGGCACATGAAAAACTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATCATAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATCCGGAGATTGGAACCCCTGGCAGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATCGGTAAGCTGAAAGACATGGGCAATTCTTTGTTGGGCCGCTTTGGGATGAGCGTTGACAACTTTAAAGCTGTTCAAGATCCGAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA | 810 | 0.4506 | MVVIQPEETETERKVVNPSESAKTAKSSASSHVDDHKEASDGFETASDTELGSDAEDTHNERGQQHQDQEVGIPPGTESSEEASHDEELKQKALAQANDAKLEGNKLFGDARFEEALSKYELALQIAPDMPSSVEVRSICHSNRAVCFMKLGKYEDTIKECTKALELNPAYLKALVRRGEAHEKLEHFEEAIADMKKIIEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVQDPNTGSYSISFQR | 269 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1154g00164 | 269 | MobiDBLite | consensus disorder prediction | 29 | 44 | - | - | |
Pral1154g00164 | 269 | Gene3D | Tetratricopeptide repeat domain | 55 | 233 | IPR011990 | GO:0005515 | |
Pral1154g00164 | 269 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 12 | 269 | - | - | |
Pral1154g00164 | 269 | Pfam | Tetratricopeptide repeat | 173 | 205 | IPR013105 | - | |
Pral1154g00164 | 269 | ProSiteProfiles | TPR repeat profile. | 172 | 205 | IPR019734 | GO:0005515 | |
Pral1154g00164 | 269 | ProSiteProfiles | TPR repeat profile. | 138 | 171 | IPR019734 | GO:0005515 | |
Pral1154g00164 | 269 | SUPERFAMILY | TPR-like | 96 | 215 | IPR011990 | GO:0005515 | |
Pral1154g00164 | 269 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
Pral1154g00164 | 269 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Pral1154g00164 | 269 | SMART | tpr_5 | 138 | 171 | IPR019734 | GO:0005515 | |
Pral1154g00164 | 269 | SMART | tpr_5 | 97 | 130 | IPR019734 | GO:0005515 | |
Pral1154g00164 | 269 | SMART | tpr_5 | 172 | 205 | IPR019734 | GO:0005515 | |
Pral1154g00164 | 269 | Pfam | Tetratricopeptide repeat | 140 | 170 | IPR001440 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1154g00164 | Pral-Chr1154 | 1062026 | 1065895 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1154g00164 | 63 | 228 | Calmodulin-binding Proteins | AT3G25230 | 32.432 | 1.94e-14 | 70.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1154g00164 | K24926 | - | qsa:O6P43_022248 | 370.933 |