Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00164 ATGGTTGTGATCCAACCGGAAGAAACTGAGACTGAACGGAAAGTCGTGAATCCCTCTGAATCTGCAAAAACTGCAAAATCGTCAGCTTCATCCCATGTCGATGACCATAAAGAAGCTTCCGATGGCTTTGAAACCGCTAGCGACACCGAGCTCGGCAGCGACGCAGAGGATACGCATAATGAACGGGGACAACAACATCAAGATCAGGAGGTTGGGATTCCTCCGGGCACTGAGTCTTCCGAAGAGGCATCACACGACGAGGAATTGAAACAGAAAGCATTGGCTCAAGCGAATGATGCAAAATTAGAAGGAAATAAGCTATTTGGGGATGCGCGATTTGAGGAGGCATTATCAAAGTATGAACTTGCTTTACAAATTGCCCCAGACATGCCTTCATCTGTTGAAGTACGCTCAATATGCCATTCAAATCGTGCTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCATATCTGAAAGCTCTGGTGAGAAGAGGCGAGGCACATGAAAAACTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATCATAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATCCGGAGATTGGAACCCCTGGCAGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATCGGTAAGCTGAAAGACATGGGCAATTCTTTGTTGGGCCGCTTTGGGATGAGCGTTGACAACTTTAAAGCTGTTCAAGATCCGAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA 810 0.4506 MVVIQPEETETERKVVNPSESAKTAKSSASSHVDDHKEASDGFETASDTELGSDAEDTHNERGQQHQDQEVGIPPGTESSEEASHDEELKQKALAQANDAKLEGNKLFGDARFEEALSKYELALQIAPDMPSSVEVRSICHSNRAVCFMKLGKYEDTIKECTKALELNPAYLKALVRRGEAHEKLEHFEEAIADMKKIIEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVQDPNTGSYSISFQR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00164 269 MobiDBLite consensus disorder prediction 29 44 - -
Pral1154g00164 269 Gene3D Tetratricopeptide repeat domain 55 233 IPR011990 GO:0005515
Pral1154g00164 269 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 12 269 - -
Pral1154g00164 269 Pfam Tetratricopeptide repeat 173 205 IPR013105 -
Pral1154g00164 269 ProSiteProfiles TPR repeat profile. 172 205 IPR019734 GO:0005515
Pral1154g00164 269 ProSiteProfiles TPR repeat profile. 138 171 IPR019734 GO:0005515
Pral1154g00164 269 SUPERFAMILY TPR-like 96 215 IPR011990 GO:0005515
Pral1154g00164 269 MobiDBLite consensus disorder prediction 52 66 - -
Pral1154g00164 269 MobiDBLite consensus disorder prediction 1 89 - -
Pral1154g00164 269 SMART tpr_5 138 171 IPR019734 GO:0005515
Pral1154g00164 269 SMART tpr_5 97 130 IPR019734 GO:0005515
Pral1154g00164 269 SMART tpr_5 172 205 IPR019734 GO:0005515
Pral1154g00164 269 Pfam Tetratricopeptide repeat 140 170 IPR001440 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00164 Pral-Chr1154 1062026 1065895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00164 63 228 Calmodulin-binding Proteins AT3G25230 32.432 1.94e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00164 K24926 - qsa:O6P43_022248 370.933