Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00163 ATGGTTGTGATCCAACCGGAAGAAACTGAGACTGAACGGAAAGTCGTGAATCCCTCTGAATCTGCAAAAACTGCAAAATCGTCAGCTTCATCCCATGTCGATGACCATAAAGAAGCTTCCGATGGCTTTGAAACCGCTAGCGACACCGAGCTCGGCAGCGACGCAGAGGATACGCATAATGAACGGGGACAACAACATCAAGATCAGGAGGTTGGGATTCCTCCGGGCACTGAGTCTTCCGAAGAGGCATCACACGACGAGGAATTGAAACAGCAGAAAGCATTGGCTCAAGCGAATGATGCAAAATTAGAAGGAAATAAGCTATTTGGGGATGCGCGATTTGAGGAGGCATTATCAAAGTATGAACTTGCTTTACAAATTGCCCCAGACATGCCTTCATCTGTTGAAGTACGCTCAATATGCCATTCAAATCGTGCTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCATATCTGAAAGCTCTGGTGAGAAGAGGCGAGGCACATGAAAAACTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATCATAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATCCGGAGATTGGAACCCCTGGCAGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATCGGTAAGCTGAAAGACATGGGCAATTCTTTGTTGGGCCGCTTTGGGATGAGCGTTGACAACTTTAAAGCTGTTCAAGATCCGAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA 813 0.4514 MVVIQPEETETERKVVNPSESAKTAKSSASSHVDDHKEASDGFETASDTELGSDAEDTHNERGQQHQDQEVGIPPGTESSEEASHDEELKQQKALAQANDAKLEGNKLFGDARFEEALSKYELALQIAPDMPSSVEVRSICHSNRAVCFMKLGKYEDTIKECTKALELNPAYLKALVRRGEAHEKLEHFEEAIADMKKIIEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVQDPNTGSYSISFQR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00163 270 MobiDBLite consensus disorder prediction 29 44 - -
Pral1154g00163 270 Pfam Tetratricopeptide repeat 141 171 IPR001440 GO:0005515
Pral1154g00163 270 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 12 270 - -
Pral1154g00163 270 ProSiteProfiles TPR repeat profile. 139 172 IPR019734 GO:0005515
Pral1154g00163 270 Gene3D Tetratricopeptide repeat domain 57 234 IPR011990 GO:0005515
Pral1154g00163 270 SUPERFAMILY TPR-like 98 216 IPR011990 GO:0005515
Pral1154g00163 270 MobiDBLite consensus disorder prediction 1 93 - -
Pral1154g00163 270 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
Pral1154g00163 270 SMART tpr_5 98 131 IPR019734 GO:0005515
Pral1154g00163 270 SMART tpr_5 139 172 IPR019734 GO:0005515
Pral1154g00163 270 SMART tpr_5 173 206 IPR019734 GO:0005515
Pral1154g00163 270 Pfam Tetratricopeptide repeat 174 206 IPR013105 -
Pral1154g00163 270 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00163 Pral-Chr1154 1062026 1065895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00163 63 229 Calmodulin-binding Proteins AT3G25230 32.065 4.60e-15 72.8