Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1154g00163 | ATGGTTGTGATCCAACCGGAAGAAACTGAGACTGAACGGAAAGTCGTGAATCCCTCTGAATCTGCAAAAACTGCAAAATCGTCAGCTTCATCCCATGTCGATGACCATAAAGAAGCTTCCGATGGCTTTGAAACCGCTAGCGACACCGAGCTCGGCAGCGACGCAGAGGATACGCATAATGAACGGGGACAACAACATCAAGATCAGGAGGTTGGGATTCCTCCGGGCACTGAGTCTTCCGAAGAGGCATCACACGACGAGGAATTGAAACAGCAGAAAGCATTGGCTCAAGCGAATGATGCAAAATTAGAAGGAAATAAGCTATTTGGGGATGCGCGATTTGAGGAGGCATTATCAAAGTATGAACTTGCTTTACAAATTGCCCCAGACATGCCTTCATCTGTTGAAGTACGCTCAATATGCCATTCAAATCGTGCTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCATATCTGAAAGCTCTGGTGAGAAGAGGCGAGGCACATGAAAAACTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATCATAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATCCGGAGATTGGAACCCCTGGCAGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATCGGTAAGCTGAAAGACATGGGCAATTCTTTGTTGGGCCGCTTTGGGATGAGCGTTGACAACTTTAAAGCTGTTCAAGATCCGAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA | 813 | 0.4514 | MVVIQPEETETERKVVNPSESAKTAKSSASSHVDDHKEASDGFETASDTELGSDAEDTHNERGQQHQDQEVGIPPGTESSEEASHDEELKQQKALAQANDAKLEGNKLFGDARFEEALSKYELALQIAPDMPSSVEVRSICHSNRAVCFMKLGKYEDTIKECTKALELNPAYLKALVRRGEAHEKLEHFEEAIADMKKIIEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVQDPNTGSYSISFQR | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1154g00163 | 270 | MobiDBLite | consensus disorder prediction | 29 | 44 | - | - | |
Pral1154g00163 | 270 | Pfam | Tetratricopeptide repeat | 141 | 171 | IPR001440 | GO:0005515 | |
Pral1154g00163 | 270 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 12 | 270 | - | - | |
Pral1154g00163 | 270 | ProSiteProfiles | TPR repeat profile. | 139 | 172 | IPR019734 | GO:0005515 | |
Pral1154g00163 | 270 | Gene3D | Tetratricopeptide repeat domain | 57 | 234 | IPR011990 | GO:0005515 | |
Pral1154g00163 | 270 | SUPERFAMILY | TPR-like | 98 | 216 | IPR011990 | GO:0005515 | |
Pral1154g00163 | 270 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
Pral1154g00163 | 270 | ProSiteProfiles | TPR repeat profile. | 173 | 206 | IPR019734 | GO:0005515 | |
Pral1154g00163 | 270 | SMART | tpr_5 | 98 | 131 | IPR019734 | GO:0005515 | |
Pral1154g00163 | 270 | SMART | tpr_5 | 139 | 172 | IPR019734 | GO:0005515 | |
Pral1154g00163 | 270 | SMART | tpr_5 | 173 | 206 | IPR019734 | GO:0005515 | |
Pral1154g00163 | 270 | Pfam | Tetratricopeptide repeat | 174 | 206 | IPR013105 | - | |
Pral1154g00163 | 270 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1154g00163 | Pral-Chr1154 | 1062026 | 1065895 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1154g00163 | 63 | 229 | Calmodulin-binding Proteins | AT3G25230 | 32.065 | 4.60e-15 | 72.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1154g00163 | K24926 | - | qsa:O6P43_022248 | 370.548 |