Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00161 ATGGCGGTGACGAAGCTTTTCTCTCTCTACATTTTCATGTTTACATTCTTATTCTGCAGCCACTACAACGACAAATCTAGTGCCTTTGCAGTCTCTTTGCCGCCTTCTTCATCTTCATCTTCTTCGGATGTCGAGCTTCTCTTGGGTAAAATCAGAGCTACCCTTCAAGGTAACGCCGATAACCTCGTTTTGTCTTCATGGAATTCCTCTATACCGCTTTGCCAATGGAGGGGACTCAAATGGATATTCGCAAATGGCTCTCCCCTGTCATGCAATGACTTGTCTTTACCCCAATGGACTAATCTTTCGCTTTTCAGAGACCCCTCTTTACATTTACTCTCTCTTCAGCTTCCTTCTGCAAATCTCTCTGGTTCGCTTCCTAGGGAGCTTGCAGAGTTTCCTATGCTTCAGAGTCTCTACCTCAACATCAATTCGTTGAGAGGGACAGTTCCTATTGAGCTTGGGTATAGTTCCTCACTCAACGATGTCGTTTTGGATGACAATATGTTGAGTGGAGCTTTGCCACCATCGATCTGGAATTTGTGTGATAAACTCGTTTCTCTTAGACTCCATGGCAACATGTTTTCCGGGTCTCTTCCTGAACCGGCATTGCCCGAATCTTCTTGCAAGAATATACAATTTCTTGATTTGGGGAACAACAACTTCTCTGGGGTTTTTCCTGAATTCATTACACATTTTGGTGGGCTGAAGCAGCTTGACTTGGGAAATAACATGTTTACGGGTTCAATCCCTCAGAGCTTAGCTGGGCTAAATAGGCTAGAGAAACTGAATCTTTCTCACAACAATTTTAGTGGGGTTTTACCTACTTTCGGTGAATCATCCAAATTTGGTGTGGAGGTTTTTGAAGGAAATAACCCTGGCTTGTGTGGGGTACCTTTGAGAGCTTGTAGTGGAACTCCTAGATTGAGCTCTGGTGCAGTTGCTGGAATAGTTATCACTCTCATGACTGGAGCTGTGGTTTTAGTTTCTTTGCTTATTGGGTATATGCAAAATAGAAGGAGGAAGGGTAAGGGAGATAGTGAAGATGAATTGGAGGAAGATGAAGATGATGATGAAGAAAATGGTGCTAGTAATGGTGCTATAGGCGTTGGTGAAGGCAAGCTTATGTTGTTCCAAGGTGGTGAGAATTTGTCATTAGATGACGTGTTGAATGCGACGGGACAAGTTATGGAGAAGACATGTTATGGGACTGTTTATAAGGCAAAGCTTGCTGATGGAGGAACCATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAGGGACAGGGCTTCGTGCTTGCCTGTTATTAAGCAATTGGGAAGGATTCGTCATGAGAATTTGATTCCTTTGAGAGCCTTCTATCAGGGGAAGAGAGGAGAAAAGCTTCTTATTTATGACTATCTTCCTCTCAGAACTCTTCATGATCTCTTACATGAAACTAAAGCTGGAAAGCCAGTGCTAAACTGGGCCAGGCGACACAAGATTGCATTGGGAATAGCCAGGGGACTAGCATATCTTCATACAGGACTTGATGTTCCAATCACTCATGGAAATGTACGATCCAAGAATGTGCTAGTTGATGAGTTCTTCGTTGCCCGGCTCACTGAGTTTGGGCTGGACAAGCTAATGATTCCTGCTGTAGCTGATGAAATGGTGGCACTTGCGAAAACAGATGGCTGCAAGGCTCCAGAGCTTCAAAGGATGAAGAAATGTAACTCGAGGACCGATGTTTATGCATTTGGGATATTACTGTTGGAGATATTGATAGGGAAGAAACCAGGTAAGAACGGGAGGAGTGGGGAGGTTGTGGATCTGCCTTCCATGGTGAAAGTGGCAGTGTTGGAGGAGACCACAATGGAAGTGTTTGATGTGGAGCTTCTGAAAGGGATAAGGAGTCCAATGGAAGATGGGTTGGTGCAAGCACTGAAGGTAGCAATGGGATGTTGTGCCCCAGTGGCTTCAGTGAGACCAAGCATGGAGGAGGTTGTGAGACAGTTGGAGGAGAATAGGCCTAGAAATAGGTCTGCTTTATATAGCCCTACAGAAACAAGAAGTGGCAGCGGCACCCCTTTTTGA 2076 0.447 MAVTKLFSLYIFMFTFLFCSHYNDKSSAFAVSLPPSSSSSSSDVELLLGKIRATLQGNADNLVLSSWNSSIPLCQWRGLKWIFANGSPLSCNDLSLPQWTNLSLFRDPSLHLLSLQLPSANLSGSLPRELAEFPMLQSLYLNINSLRGTVPIELGYSSSLNDVVLDDNMLSGALPPSIWNLCDKLVSLRLHGNMFSGSLPEPALPESSCKNIQFLDLGNNNFSGVFPEFITHFGGLKQLDLGNNMFTGSIPQSLAGLNRLEKLNLSHNNFSGVLPTFGESSKFGVEVFEGNNPGLCGVPLRACSGTPRLSSGAVAGIVITLMTGAVVLVSLLIGYMQNRRRKGKGDSEDELEEDEDDDEENGASNGAIGVGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGGTIALRLLREGSCRDRASCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEMVALAKTDGCKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEVVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKVAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00161 691 Gene3D Ribonuclease Inhibitor 42 205 IPR032675 -
Pral1154g00161 691 SUPERFAMILY Protein kinase-like (PK-like) 400 667 IPR011009 -
Pral1154g00161 691 ProSiteProfiles Protein kinase domain profile. 391 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00161 691 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 670 IPR046959 -
Pral1154g00161 691 Gene3D Phosphorylase Kinase; domain 1 374 467 - -
Pral1154g00161 691 Pfam Leucine rich repeat 212 270 IPR001611 GO:0005515
Pral1154g00161 691 MobiDBLite consensus disorder prediction 341 365 - -
Pral1154g00161 691 MobiDBLite consensus disorder prediction 667 691 - -
Pral1154g00161 691 FunFam Leucine-rich repeat receptor-like protein kinase 209 303 - -
Pral1154g00161 691 SUPERFAMILY L domain-like 89 302 - -
Pral1154g00161 691 Gene3D Transferase(Phosphotransferase) domain 1 469 683 - -
Pral1154g00161 691 Pfam Protein tyrosine and serine/threonine kinase 395 666 IPR001245 GO:0004672|GO:0006468
Pral1154g00161 691 Gene3D Ribonuclease Inhibitor 206 305 IPR032675 -
Pral1154g00161 691 MobiDBLite consensus disorder prediction 672 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00161 Pral-Chr1154 1039823 1043080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00161 7 691 Receptor kinase-like Gene Family AT3G24660 71.720 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral1154g00161 PK_Tyr_Ser-Thr 2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00161 - - gmx:100814814 1086.63