Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00152 ATGAATGGTGGTGTGGAACCGCAAGTGCAAGTAGGAGATTTCTTTGAAGAAGAAGAAGAAACAGTTATGGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCAGAACAATAATGGTGGCCATCAAGGTGATGAGGATGATCTTCTTGCTGGTGTAATGGACGACGCTTCTCTGTTCTATGCAGATGATGACTTCCCTTGTCTTCCAGATTTCTCATGCATGTCGTCTTCTTCGTCTTCATCTTCACCCGCAGCAGTCACAGTCAAAACCGTCACGTGCGCCTCTTCCTCCTCCAATACGTCGTCGTCTAATTTGGCGGCTTCCTGGGCGAATCTCAAGTCAGATGCAGAGCTTCGTCTCCCACCGCCACAGACCCAGCCGCCGGCGTTATCCTCCACTGCTTCTATGGAGATCCAGCAGCCGCCGGATCATCAAGGAGGCACTAATGACAGCGGAGATTGTCTGGACATGATGGACACATTTGGAACTATGGAACTCATGGAGGGAAATGAATTCTTCGATCCTTCATCAATCTTTGAAAATGAAGAGAATCTATTGGACGAATTTGTCCAGTGGGACCCGAATCCGCCGGAGGAGGGACATGCAAGTGGTGGAATGATACTGCAGGAGGAACATCAACAGCAGCAGCAACAACAACCACCGCCATTGGCGGAGACGGCGACGGATGAAGAGATGAGCTCGGTGTTCTTGGAATGGCTGAAGATAAACAAAGACAGCGTGTCTGCAACTGATTTGAGGAACGTGAGGTTGAAGAAGGCGACAATAGAGTGTGCAGCGAAGCGTCTTGGTGGAGGGAAAGAAGGCATGAAGCAATTGTTGAAGCTAATTCTGGAATGGGTTCAGACGAGCCATCTTCAGAAGAAAAGACGCCTGGAAAATCATGTTAATAACAATAATGAGAATGACAATCTTTTCACCACTCATTTTCTGGATACCACAAACCCTAGCTCTAATCTCAACCACCAACCTTCATTTGGCCTGGAATGGATCTCTCAGCCGCCGTACGGGGTTGATCCAGCGGCTTTACCGGCGGGCCCGCCACCATTTCCGCAACCTCTAGTTGGTTATAGCAATAACCTGGGAGACCCGTTTTCCAGCGGGGCTTCAAATGAATTTCATGCGCCGGATTCTTCACATTCATGGCCTCATTCGCAGTTTACTGTTTATACTAACCATCAACCATATGGGAACAATAATCTACACCCGTCGGCGATGGCGGGATTTGGCGGTTACGGGAACAATCAGTACCCGTATCAGTATTTTCATGGCGGCGGCGGCCCAGATAGATTGGGTCCGTTGGCGACAAAAGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGACGGCATTTATCTCATCACAGGCATCACAATAATGTCCAAGACCATCAACAAAACCAGCAGAGCCCAACCAGTGATTATTACACTGCTGCTACAGTTGTACCTCATGCAAATCCACCCAACTGGTTGTATTGGCCGCCGCCGGCGCCGTCCAACGGTGGAGCCGCTTCTGTTGTGCCAACGTCTCAGGGGGAGCCACCGCCGTCGGGGAGAAATGTGGGGGATCGGATGGCGGCCATGCAATCCGACCAGAATAATAATCAACAAAACCGGGTCTCATCAGATAAACGACAGGGATGGAAACCAGAGAAGAACTTGAAGTTCCTTCTGCAGAAAGTGTTAAAGCAAAGCGACGTGGGTAATCTGGGGAGGATAGTGTTGCCAAAGAGAGAAGCAGAAACCCATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCTATAGCAATGGAAGACATTGGAACTTGTCGTGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAATACAGGAGATTTTGTGAGAGCCAATGGACTTCAGGAAGGAGACTTCATAGTGATATATTCAGATGTAAAATGTGGCAAATATATGATAAGGGGTGTGAAGGTAAGGCAAGCAGCTGGCACCAAAGTTGAGACGAAGAAAGCAGCCTCAGGAAAATGCCAGAAGGCTAATGGATCTGATACATTTTCACCAAACAAGAATGAGAGAACGAGGCAATAA 2103 0.485 MNGGVEPQVQVGDFFEEEEETVMAAVKEREIWLQNNNGGHQGDEDDLLAGVMDDASLFYADDDFPCLPDFSCMSSSSSSSSPAAVTVKTVTCASSSSNTSSSNLAASWANLKSDAELRLPPPQTQPPALSSTASMEIQQPPDHQGGTNDSGDCLDMMDTFGTMELMEGNEFFDPSSIFENEENLLDEFVQWDPNPPEEGHASGGMILQEEHQQQQQQQPPPLAETATDEEMSSVFLEWLKINKDSVSATDLRNVRLKKATIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRRLENHVNNNNENDNLFTTHFLDTTNPSSNLNHQPSFGLEWISQPPYGVDPAALPAGPPPFPQPLVGYSNNLGDPFSSGASNEFHAPDSSHSWPHSQFTVYTNHQPYGNNNLHPSAMAGFGGYGNNQYPYQYFHGGGGPDRLGPLATKEARKKRMARQRRHLSHHRHHNNVQDHQQNQQSPTSDYYTAATVVPHANPPNWLYWPPPAPSNGGAASVVPTSQGEPPPSGRNVGDRMAAMQSDQNNNQQNRVSSDKRQGWKPEKNLKFLLQKVLKQSDVGNLGRIVLPKREAETHLPELEERDGISIAMEDIGTCRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQAAGTKVETKKAASGKCQKANGSDTFSPNKNERTRQ 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00152 700 MobiDBLite consensus disorder prediction 117 155 - -
Pral1154g00152 700 CDD BfiI_C_EcoRII_N_B3 560 661 - -
Pral1154g00152 700 ProSiteProfiles B3 DNA-binding domain profile. 562 664 IPR003340 GO:0003677
Pral1154g00152 700 MobiDBLite consensus disorder prediction 672 700 - -
Pral1154g00152 700 MobiDBLite consensus disorder prediction 496 527 - -
Pral1154g00152 700 SUPERFAMILY DNA-binding pseudobarrel domain 561 656 IPR015300 -
Pral1154g00152 700 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 227 674 IPR044800 GO:0003700
Pral1154g00152 700 MobiDBLite consensus disorder prediction 128 146 - -
Pral1154g00152 700 MobiDBLite consensus disorder prediction 209 223 - -
Pral1154g00152 700 Pfam B3 DNA binding domain 563 659 IPR003340 GO:0003677
Pral1154g00152 700 FunFam B3 domain-containing transcription factor FUS3 558 673 - -
Pral1154g00152 700 Gene3D - 558 677 IPR015300 -
Pral1154g00152 700 MobiDBLite consensus disorder prediction 446 462 - -
Pral1154g00152 700 MobiDBLite consensus disorder prediction 533 552 - -
Pral1154g00152 700 MobiDBLite consensus disorder prediction 443 477 - -
Pral1154g00152 700 MobiDBLite consensus disorder prediction 533 547 - -
Pral1154g00152 700 SMART B3_2 562 664 IPR003340 GO:0003677
Pral1154g00152 700 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00152 Pral-Chr1154 988129 990716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00152 412 679 B3 DNA Binding Superfamily AT3G24650 60.284 3.66e-92 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral1154g00152 B3 3.2e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00152 K09287 - gmx:100795226 601.668