Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00121 ATGGCCGAGGTGAAATCGGTGGAGTGTTGCCTGGAGAATAAACAAACTATTGCTGCTTCTAGTTCCTCTATATCTGAAAGCAGTGGCAGTGCTCTACCCAAGTCCCCTGGAATATGTAGCCCAACATCCGCATCACCCTCTCATCGGAGAACTACTGGCCCTATAAGGCGTGCGAAGGGTGGTTGGACGGCTGAAGAGGATGAGACACTAAGGAATGCTGTTGCAATTTTCAAGGGAAAGAATTGGAAGAAGATAGCTGAGTTTTTCCCTGATAGATCAGAAGTGCAATGTCTCCACAGATGGCAAAAAGTTCTTAACCCAGAACTTGTTAAAGGGCCTTGGACTCAGGAGGAGGATGATAAAATTGTTGCACTAGTGTCAAAATATGGGCCAACAAAATGGTCAGTAATAGCCAAGTCCCTGCCTGGTCGTATAGGGAAACAGTGCCGAGAGCGATGGCACAACCATCTTAATCCTGACATAAAGAAGGATGCCTGGACTTTGGCAGAGGAATTAGCCGTCATGAATTTTCACTGTATACATGGGAACAAATGGGCTGAAATTGCTAAGGTCCTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAGAAGTTGGACTTTTATTTAACTACTGGACAACTTCCACCAATTTCAAAGAATAGTCCAAAAGTTGAGGTCAAAGACAAAATAATATTCTCTGCAACAGAAACAATTCTTGTTAGTTCAAATAAAGTAGTAGATGCGGCTACTGCAACATCATCAGAAACTACAGAGATTAATAAGCAAGATGACAGTGGTAAGAATCACTCAAGGAATATATCAACAGCAAGAGATGTTGGTGATTCTTCAAATGTCCCTGCAAATGAATCTGCTGATTCTGATTGTATAGAATGCAAGCCCAAGTCCTCCAATTTAGACTTCAGCTGCTGCGACTCAGAACCAATGTCAAGAGACAATCCTGGAATGAATGGTGAACAAGCACATGAGAAATCTGGACTCAATGACAAGCTAGCAAGTGAGCATTGTATAAATAATGGTGAAATGAGTAGTAACAGGTTGACCACAAAACCTTGTTCACAGGAAGGTCCAACTTGTGGTTCTTTATGTTATGAACCACCGCAGATGGAGAATTTGGTTCCCTTAGATTCTCTTTATTTAAATATATTCTGTCTCCAAAATGACTACAGTTCTACCCCCGTGATGTCTCCTGCTGGTTTCTTCACTCCACCTTGTGTGAAGGGTCGTGAATTTTTCAAACAGACTCCTGAATCAATATTGAAAATGGCTGCTAAGACTTACCCAAATACCCCTGCCATATTGAGGAAGAGAAGGACTGGAGTCCAGACACAAGTCACTCCCAATAAAGTTGTGAAAGTTGATGGAGAATCTCATGCTTCTATTAGTCAGCAGAGAAATAAGAATAATACTGATTCTGAAGTAGGGAGGTTCTCCGAGAGTCCAGCAAGCCATGTCCATGGCAATGACCTTCCCGATGGCAAAATTTTCAATGCATCTCCTCCCTACCGGTTAAGATCCAAGCGAACAGCAGTTGTCAAGTCTGTGGAGAAACAACTTGAGCTTGCATTTGATCAAGAAAAGGACAACGGAATCATGAGGAAAATGGAAAAGTCTTCAACGTAG 1662 0.4218 MAEVKSVECCLENKQTIAASSSSISESSGSALPKSPGICSPTSASPSHRRTTGPIRRAKGGWTAEEDETLRNAVAIFKGKNWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVALVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLAEELAVMNFHCIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLTTGQLPPISKNSPKVEVKDKIIFSATETILVSSNKVVDAATATSSETTEINKQDDSGKNHSRNISTARDVGDSSNVPANESADSDCIECKPKSSNLDFSCCDSEPMSRDNPGMNGEQAHEKSGLNDKLASEHCINNGEMSSNRLTTKPCSQEGPTCGSLCYEPPQMENLVPLDSLYLNIFCLQNDYSSTPVMSPAGFFTPPCVKGREFFKQTPESILKMAAKTYPNTPAILRKRRTGVQTQVTPNKVVKVDGESHASISQQRNKNNTDSEVGRFSESPASHVHGNDLPDGKIFNASPPYRLRSKRTAVVKSVEKQLELAFDQEKDNGIMRKMEKSST 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00121 553 MobiDBLite consensus disorder prediction 22 61 - -
Pral1154g00121 553 MobiDBLite consensus disorder prediction 318 341 - -
Pral1154g00121 553 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Pral1154g00121 553 Gene3D - 58 110 - -
Pral1154g00121 553 SMART sant 110 159 IPR001005 -
Pral1154g00121 553 SMART sant 162 210 IPR001005 -
Pral1154g00121 553 SMART sant 58 107 IPR001005 -
Pral1154g00121 553 Gene3D - 111 162 - -
Pral1154g00121 553 CDD SANT 113 157 IPR001005 -
Pral1154g00121 553 MobiDBLite consensus disorder prediction 464 514 - -
Pral1154g00121 553 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Pral1154g00121 553 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Pral1154g00121 553 MobiDBLite consensus disorder prediction 22 50 - -
Pral1154g00121 553 FunFam Transcriptional activator Myb isoform A 58 110 - -
Pral1154g00121 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Pral1154g00121 553 CDD SANT 62 105 IPR001005 -
Pral1154g00121 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Pral1154g00121 553 FunFam Transcriptional activator Myb isoform A 111 163 - -
Pral1154g00121 553 MobiDBLite consensus disorder prediction 256 303 - -
Pral1154g00121 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Pral1154g00121 553 MobiDBLite consensus disorder prediction 470 490 - -
Pral1154g00121 553 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Pral1154g00121 553 MobiDBLite consensus disorder prediction 279 297 - -
Pral1154g00121 553 PANTHER MYB PROTEIN-RELATED 59 130 - -
Pral1154g00121 553 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Pral1154g00121 553 Gene3D - 164 236 - -
Pral1154g00121 553 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Pral1154g00121 553 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Pral1154g00121 553 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Pral1154g00121 553 CDD SANT 165 208 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00121 Pral-Chr1154 815287 824384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00121 2 550 MYB Transcription Factor Family AT3G09370 45.144 2.95e-135 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral1154g00121 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00121 K09422 - gmx:778081 778.474