Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00109 ATGGTTGACTTCTCAGGCATTTCATCAGAGACAGTAATGATGGAGGAAGCAGTAATGGCAGCTTATTCGTCAGATGGATCAGAGGAAGAAGACCTCTTGAGAGAGCTTTTAGATTATAACTATCCTTTCTCCTCAACTGAAGCCACCGACACAATAAGATCAGCTTCCACCATTAACTCCTTCATCTCCAACATTTATTCAGGACCTACCATTTCCGATATTGAAAGTGCTTTGTCATTTACCAACCACAAACAACATTCCCAAGAAGACTTCTCCTTATCCAGGGTATCGATTCTGGAAAGAGGACTGAGCAAGATAGAGAATAAGTATACTCTGAAAATGAAGTGCTTTGGGAATGGCATGGGCGATGATGGATATAAGTGGAGGAAGTACGGACAGAAGTCTATTAAGAATAGTCCAAATCCTAGGAGCTATTATAGATGCACTAATCCAAGGTGTAATGCCAAGAAGCAAGTGGAAAGATGCAATGAGGACCCAGACACACTTATTGTCACTTACGAGGGGCTTCATCTTCACTTTGCTTATCCATATTTGTTGATGACTCAGGCCCATGAGTCCTCTCCACCACCAACAAAGAGGCCCAAGACCAATACGACCTTTACCCAGGCCCAATCCCAGGAAGGCCCACACCCATTAGAATCTGATCAGGCTCAGGCCCATGAGATTAGTGTGGGATCGCAGGGCTTGCTTGAAGACATGGTGCCTTTGATGATTCGAAATCCTACCATTAGAAACTTTAATCCTTTGCAGTCTTAA 777 0.435 MVDFSGISSETVMMEEAVMAAYSSDGSEEEDLLRELLDYNYPFSSTEATDTIRSASTINSFISNIYSGPTISDIESALSFTNHKQHSQEDFSLSRVSILERGLSKIENKYTLKMKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERCNEDPDTLIVTYEGLHLHFAYPYLLMTQAHESSPPPTKRPKTNTTFTQAQSQEGPHPLESDQAQAHEISVGSQGLLEDMVPLMIRNPTIRNFNPLQS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00109 258 MobiDBLite consensus disorder prediction 191 219 - -
Pral1154g00109 258 MobiDBLite consensus disorder prediction 191 224 - -
Pral1154g00109 258 SMART WRKY_cls 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1154g00109 258 Pfam WRKY DNA -binding domain 123 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1154g00109 258 Gene3D WRKY domain 118 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1154g00109 258 ProSiteProfiles WRKY domain profile. 117 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1154g00109 258 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 214 IPR044810 GO:0003700
Pral1154g00109 258 SUPERFAMILY WRKY DNA-binding domain 120 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00109 Pral-Chr1154 709042 711676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00109 59 252 WRKY Transcription Factor Family AT5G43290 42.857 7.68e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral1154g00109 WRKY 7.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00109 - - gmx:100810459 282.337